STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

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E.coli BL21(DE3) proteome

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
Order Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
First Level
Secretion
System
First Level
Targeting
Chaperoning
Second Level
Secretion
System
Second Level
Targeting
Chaperoning
E.coli Core
Proteome
(yes/no)
basic proteome
C5W0B1_ECOBD
C5W0B1
atl

ybaZ

B21_00410 ECD_00406
DNA base-flipping protein (Predicted methyltransferase)
Cytoplasmic
A
 
 
 
 
 
yes
yes
C6EB38_ECOBD
C5W0L5
insL-2

insL-1 insL-3 insL-4 insL-5

B21_00016 B21_00394 B21_00537 B21_01755 B21_02569 ECBD_0970 ECBD_3075 ECBD_3217
Putative transposase insL for insertion sequence IS186 (Putative uncharacterized protein insL-1) (Putative uncharacterized protein insL-3) (Transposase IS4 family protein)
Cytoplasmic
A
 
 
 
 
 
 
no
C6EB27_ECOBD
C6EB27
ileS
B21_00029 ECBD_3590 ECD_00030
Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA ligase)
Cytoplasmic
A
Cytoplasm
 
 
 
 
yes
yes
C6EB28_ECOBD
C6EB28
ribF
B21_00028 ECBD_3591 ECD_00029
Putative regulator (EC 2.7.1.26) (EC 2.7.7.2) (Riboflavin biosynthesis protein RibF)
Cytoplasmic
A
 
 
 
 
 
yes
yes
C6EB37_ECOBD
C6EB37
 
ECBD_0969 ECBD_3074 ECBD_3218 ECBD_3602
Putative uncharacterized protein
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EB42_ECOBD
C6EB42
yaaW
B21_00011 ECBD_3607 ECD_00011
Putative uncharacterized protein (Putative uncharacterized protein yaaW)
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EB44_ECOBD
C6EB44
mogA

mog

B21_00009 ECBD_3609 ECD_00009
Molybdenum cofactor biosynthesis protein (Molybdenum cofactor synthesis domain protein)
Cytoplasmic
A
 
 
 
 
 
yes
yes
C6EB46_ECOBD
C6EB46
ybl97

vioA

B21_01931 ECBD_1619 ECD_01942
DegT/DnrJ/EryC1/StrS aminotransferase (VioA, involved in dTDP-N-acetylviosamine synthesis)
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EB48_ECOBD
C6EB48
ybl95

wbbA

B21_01929 ECBD_1621 ECD_01940
Putative glycosyltransferase WbbA (Putative uncharacterized protein)
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EB54_ECOBD
C6EB54
manC

ybl88

B21_01920 ECBD_1628 ECD_01933
Mannose-1-phosphate guanylyltransferase (Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase) (EC 2.7.7.13)
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EB55_ECOBD
C6EB55
manB

ybl87

B21_01919 ECBD_1629 ECD_01932
Phosphomannomutase (EC 5.4.2.8)
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EB59_ECOBD
C6EB59
hisI
B21_01914 ECBD_1633 ECD_01928
Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (EC 3.5.4.19) (EC 3.6.1.31) (Phosphoribosyl-ATP diphosphatase)
Cytoplasmic
A
Cytoplasm
 
 
 
 
 
yes
C6EI99_ECOBD
C5W2A1
clpA
B21_00893 ECBD_2712
ATP-dependent Clp protease, ATP-binding subunit clpA
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EB60_ECOBD
C6EB60
hisF
B21_01913 ECBD_1634 ECD_01927
Imidazole glycerol phosphate synthase subunit hisF (EC 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF) (ImGP synthase subunit hisF)
Cytoplasmic
A
Cytoplasm
 
 
 
 
yes
yes
C6EB61_ECOBD
C6EB61
hisA
B21_01912 ECBD_1635 ECD_01926
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase)
Cytoplasmic
A
Cytoplasm
 
 
 
 
 
yes
C6EB62_ECOBD
C6EB62
hisH
B21_01911 ECBD_1636 ECD_01925
Imidazole glycerol phosphate synthase subunit HisH (EC 2.4.2.-) (Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit)
Cytoplasmic
A
 
 
 
 
 
yes
yes
C6EB64_ECOBD
C6EB64
hisC
B21_01909 ECBD_1638 ECD_01923
Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
Cytoplasmic
A
 
 
 
 
 
yes
yes
C6EB71_ECOBD
C6EB71
yeeD
B21_01901 ECBD_1645 ECD_01915
Putative uncharacterized protein yeeD (SirA family protein)
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EB72_ECOBD
C6EB72
sbcB
B21_01900 ECBD_1646 ECD_01914
Exodeoxyribonuclease I (EC 3.1.11.1) (Exonuclease I) (EC 3.1.11.1)
Cytoplasmic
A
 
 
 
 
 
yes
yes
C6EB74_ECOBD
C6EB74
sbmC
B21_01898 ECBD_1648 ECD_01912
DNA gyrase inhibitor (Transcription activator effector binding)
Cytoplasmic
A
 
 
 
 
 
yes
yes
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