STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

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E.coli BL21(DE3) proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
Order Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
First Level
Secretion
System
First Level
Targeting
Chaperoning
Second Level
Secretion
System
Second Level
Targeting
Chaperoning
E.coli Core
Proteome
(yes/no)
basic proteome
C6EB79_ECOBD
C6EB79
cobU
B21_01891 ECBD_1656 ECD_01902
Adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase (Adenosylcobinamide-phosphate guanylyltransferase) (EC 2.7.7.62)
Cytoplasmic
A
 
 
 
 
 
yes
yes
C6EB81_ECOBD
C6EB81
cobT
B21_01889 ECBD_1658 ECD_01900
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (EC 2.4.2.21) (N(1)-alpha-phosphoribosyltransferase)
Cytoplasmic
A
 
 
 
 
 
yes
yes
C6EB86_ECOBD
C6EB86
yeeN
B21_01884 ECBD_1663 ECD_01895
Putative uncharacterized protein (Putative uncharacterized protein yeeN)
Cytoplasmic
A
 
 
 
 
 
yes
no
C6EB87_ECOBD
C6EB87
amn
B21_01883 ECBD_1664 ECD_01894
AMP nucleosidase (EC 3.2.2.4)
Cytoplasmic
A
 
 
 
 
 
yes
yes
C6EB90_ECOBD
C6EB90
 
ECBD_1668
Putative uncharacterized protein
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EB92_ECOBD
C6EB92
 
ECBD_0775 ECBD_1670
Transposase IS4 family protein
Cytoplasmic
A
 
 
 
 
 
 
no
C6EB95_ECOBD
C6EB95
 
ECBD_1674 ECBD_4170
Transposase IS4 family protein
Cytoplasmic
A
 
 
 
 
 
 
no
C6EB99_ECOBD
C6EB99
 
ECBD_1678
Two component heavy metal response transcriptional regulator, winged helix family
Cytoplasmic
A
 
 
 
 
 
yes
yes
C6EBA1_ECOBD
C6EBA1
hchA
ECBD_1680
ThiJ/PfpI domain protein
Cytoplasmic
A
 
 
 
 
 
yes
yes
C6EBA2_ECOBD
C6EBA2
 
ECBD_1681
Putative uncharacterized protein
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EBA5_ECOBD
C6EBA5
 
ECBD_1685
Cytosine-specific methyltransferase (EC 2.1.1.37)
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EBA6_ECOBD
C6EBA6
 
ECBD_1686
DNA mismatch endonuclease Vsr
Cytoplasmic
A
 
 
 
 
 
 
yes
C5W2G3_ECOBD
C5W2G3
ykgM

rpmE2

B21_00259 ECD_00255
50S ribosomal protein L31 (Predicted ribosomal protein)
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EBA9_ECOBD
C6EBA9
 
ECBD_1689
Putative uncharacterized protein
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EBB1_ECOBD
C6EBB1
 
ECBD_1691
Mannosyl-3-phosphoglycerate phosphatase family protein
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EBB2_ECOBD
C6EBB2
 
ECBD_1692
Putative uncharacterized protein
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EBB3_ECOBD
C6EBB3
dsrB
ECBD_1693
Protein dsrB
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EBC4_ECOBD
C6EBC4
 
ECBD_1704
ATPase, FliI/YscN family (EC 3.6.3.14)
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EBC5_ECOBD
C6EBC5
 
ECBD_1705
Flagellar assembly protein FliH
Cytoplasmic
A
 
 
 
 
 
 
yes
C5W2J4_ECOBD
C5W2J4
lacA
B21_00300 ECD_00296
Galactoside O-acetyltransferase (EC 2.3.1.18) (Galactoside O-acetyltransferase monomer, subunit of galactoside O-acetyltransferase) (EC 2.3.1.18)
Cytoplasmic
A
Cytoplasm
 
TF
 
 
 
yes
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