STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

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E.coli BL21(DE3) proteome

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
Order Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
First Level
Secretion
System
First Level
Targeting
Chaperoning
Second Level
Secretion
System
Second Level
Targeting
Chaperoning
E.coli Core
Proteome
(yes/no)
basic proteome
C6EBM0_ECOBD
C6EBM0
hpaH
ECBD_3670 ECD_04226
2-oxo-hept-3-ene-1,7-dioate hydratase (2-oxo-hepta-3-ene-1,7-dioic acid hydratase) (EC 4.2.1.80)
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EBM3_ECOBD
C6EBM3
ybl222

hpaA

B21_04189 ECBD_3673 ECD_04223
HpaA (Transcriptional regulator, AraC family)
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EBM4_ECOBD
C6EBM4
hpaB
B21_04188 ECBD_3674 ECD_04222
4-hydroxyphenylacetate 3-monooxygenase (4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit)
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EBM5_ECOBD
C6EBM5
hpaC

ybl221

B21_04187 ECBD_3675 ECD_04221
4-hydroxyphenylacetate 3-monooxygenase, reductase component (4-hydroxyphenylacetate 3-monooxygenase, reductase subunit)
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EBM7_ECOBD
C6EBM7
yjiX
B21_04185 ECBD_3677 ECD_04219
Putative uncharacterized protein (Putative uncharacterized protein yjiX)
Cytoplasmic
A
 
 
 
 
 
 
yes
C6EBM8_ECOBD
C6EBM8
yjiA
B21_04184 ECBD_3678 ECD_04218
Cobalamin synthesis protein P47K (Predicted GTPase)
Cytoplasmic
A
 
 
 
 
 
 
yes
C5W292_ECOBD
C5W292
ybl53
B21_00857 ECD_00851
Prophage P2 OGR-like protein (Ybl53)
Nucleoid
N
Cell membrane | Lipid-anchor
 
 
 
 
 
no
C6EB34_ECOBD
C6EB34
 
ECBD_3599
Transcriptional regulator, LysR family
Nucleoid
N
 
 
 
 
 
yes
yes
C6EB68_ECOBD
C6EB68
 
ECBD_1642
Transcriptional regulator, LysR family
Nucleoid
N
 
 
 
 
 
yes
yes
C6EB83_ECOBD
C6EB83
nac
B21_01887 ECBD_1660 ECD_01898
DNA-binding transcriptional dual regulator of nitrogen assimilation (Transcriptional regulator, LysR family)
Nucleoid
N
 
 
 
 
 
yes
yes
C6EB84_ECOBD
C6EB84
cbl
B21_01886 ECBD_1661 ECD_01897
DNA-binding transcriptional activator of cysteine biosynthesis (Transcriptional regulator, LysR family)
Nucleoid
N
 
 
 
 
 
yes
yes
C5W2G0_ECOBD
C5W2G0
matA

ykgK

B21_00256 ECD_00253
Predicted regulator
Nucleoid
N
Cytoplasm
 
 
 
 
 
yes
C6EBB4_ECOBD
C6EBB4
 
ECBD_1694
Transcriptional regulator, LuxR family
Nucleoid
N
 
 
 
 
 
 
yes
C5W2J7_ECOBD
C5W2J7
mhpR
B21_00304
MhpR transcriptional activator
Nucleoid
N
 
 
 
 
 
 
yes
C6EBD9_ECOBD
C6EBD9
 
ECBD_1720
RNA polymerase sigma factor
Nucleoid
N
 
 
 
 
 
 
yes
C6EBE5_ECOBD
C6EBE5
 
ECBD_1726
Transcriptional regulator, LuxR family
Nucleoid
N
 
 
 
 
 
 
yes
C6EBE8_ECOBD
C6EBE8
 
ECBD_1729
Two component transcriptional regulator, LuxR family
Nucleoid
N
 
 
 
 
 
 
yes
C6EBH3_ECOBD
C6EBH3
creB
B21_04239 ECBD_3622 ECD_04274
DNA-binding response regulator in two-component regulatory system with CreC (Two component transcriptional regulator, winged helix family)
Nucleoid
N
 
 
 
 
 
yes
yes
C6EBH5_ECOBD
C6EBH5
rob
B21_04237 ECBD_3624 ECD_04272
DNA-binding transcriptional activator (Transcriptional regulator, AraC family)
Nucleoid
N
 
 
 
 
 
yes
yes
C6EBH8_ECOBD
C6EBH8
trpR
B21_04234 ECBD_3627 ECD_04269
Trp operon repressor
Nucleoid
N
Cytoplasm
 
 
 
 
 
yes
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