STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

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E.coli BL21(DE3) proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
Order Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
First Level
Secretion
System
First Level
Targeting
Chaperoning
Second Level
Secretion
System
Second Level
Targeting
Chaperoning
E.coli Core
Proteome
(yes/no)
basic proteome
C6EB29_ECOBD
C6EB29
yaaY
B21_00027 ECBD_3592 ECD_00028
Putative uncharacterized protein (Putative uncharacterized protein yaaY)
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
 
 
 
 
yes
C6EB39_ECOBD
C6EB39
dnaJ
B21_00015 ECBD_3604 ECD_00015
Chaperone protein dnaJ
Peripheral inner membrane protein facing the cytoplasm
F1
Cytoplasm
 
 
 
 
 
yes
C5W296_ECOBD
C5W296
ybjX
B21_00888
Conserved protein
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
 
 
 
 
yes
C6EB40_ECOBD
C6EB40
dnaK
B21_00014 ECBD_3605 ECD_00014
Chaperone protein DnaK (Molecular chaperone DnaK)
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
 
 
 
yes
yes
C6EB49_ECOBD
C6EB49
wbbB
B21_01928 ECBD_1622 ECD_01939
Putative glycosyltransferase WbbB (Putative uncharacterized protein)
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
 
 
 
 
yes
C6EB51_ECOBD
C6EB51
wbbC
B21_01925 ECBD_1624 ECD_01937
Glycosyl transferase group 1 (Putative glycosyltransferase WbbC)
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
 
 
 
 
yes
C6EB56_ECOBD
C6EB56
gnd
B21_01917 ECBD_1630 ECD_01931
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
 
 
 
yes
yes
C6EB63_ECOBD
C6EB63
hisB
B21_01910 ECBD_1637 ECD_01924
Histidinol-phosphatase (EC 3.1.3.15) (Imidazole glycerol-phosphate dehydratase/histidinol phosphatase) (EC 3.1.3.15) (EC 4.2.1.19)
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
TF
 
 
yes
yes
C6EB66_ECOBD
C6EB66
hisG
B21_01907 ECBD_1640 ECD_01921
ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17)
Peripheral inner membrane protein facing the cytoplasm
F1
Cytoplasm
 
 
 
 
yes
yes
C6EB91_ECOBD
C6EB91
yeeI

mtfA

B21_01880 ECBD_1669 ECD_01890
Putative uncharacterized protein (Putative uncharacterized protein yeeI)
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
 
 
 
yes
yes
C6EBB9_ECOBD
C6EBB9
 
ECBD_1699
Flagellar motor switch protein FliN
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
 
 
 
 
yes
C6EBC0_ECOBD
C6EBC0
 
ECBD_1700
Flagellar motor switch protein FliM
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
 
 
 
 
yes
C6EBC3_ECOBD
C6EBC3
 
ECBD_1703
Flagellar export protein FliJ
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
 
 
 
 
yes
C6EBC6_ECOBD
C6EBC6
 
ECBD_1706
Flagellar motor switch protein FliG
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
 
 
 
 
yes
C6EBE4_ECOBD
C6EBE4
 
ECBD_1725
ABC transporter related
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
 
 
 
 
yes
C6EBF8_ECOBD
C6EBF8
yecI

ftnB

B21_01859 ECBD_1739 ECD_01870
Ferritin Dps family protein (Predicted ferritin-like protein)
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
 
 
 
yes
yes
C6EBG0_ECOBD
C6EBG0
araG
B21_01857 ECBD_1741 ECD_01868
ABC transporter related (Fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components)
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
 
 
 
yes
yes
C6EBG1_ECOBD
C6EBG1
talB

tal

B21_00008 ECBD_3610 ECD_00008
Transaldolase (EC 2.2.1.2)
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
TF
 
 
yes
yes
C6EBG7_ECOBD
C6EBG7
thrA
B21_00002 ECBD_3616 ECD_00002
Aspartate kinase (EC 1.1.1.3) (EC 2.7.2.4) (Bifunctional aspartokinase I/homoserine dehydrogenase I) (EC 1.1.1.3) (EC 2.7.2.4)
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
TF
 
 
yes
yes
C6EBI0_ECOBD
C6EBI0
yjjK
B21_04232 ECBD_3629 ECD_04267
ABC transporter related (Fused predicted transporter subunits of ABC superfamily: ATP-binding components)
Peripheral inner membrane protein facing the cytoplasm
F1
 
 
TF
 
 
yes
yes
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