STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

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E.coli BL21(DE3) proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
Order Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
First Level
Secretion
System
First Level
Targeting
Chaperoning
Second Level
Secretion
System
Second Level
Targeting
Chaperoning
E.coli Core
Proteome
(yes/no)
basic proteome
C6EEZ8_ECOBD
C6EEZ8
ybl196
B21_03735 ECBD_4124 ECD_03786
Glycoporin (Putative glycoporin)
Outer Membrane Lipoprotein
I
 
 
 
 
 
 
yes
C6V9J9_ECOBD
C6V9J9
 
ECD_00837
Fels-2 prophage protein
Outer Membrane Lipoprotein
I
 
 
 
 
 
 
yes
C6EBD3_ECOBD
C6EBD3
 
ECBD_1714
Putative uncharacterized protein
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
 
yes
C6EBF5_ECOBD
C6EBF5
 
ECBD_1736
Putative uncharacterized protein
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
 
yes
C5W2T0_ECOBD
C5W2T0
gfcE

yccZ

B21_00993 ECD_00986
Predicted exopolysaccharide export protein
Outer Membrane Lipoprotein
I
Cell outer membrane | Multi-pass membrane protein
SEC
 
LOL: Localization Of Lipoproteins
 
 
yes
C6EC25_ECOBD
C6EC25
yeaY
B21_01764 ECBD_1836 ECD_01776
Outer membrane lipoprotein, Slp family (Predicted lipoprotein)
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
yes
yes
C6EC38_ECOBD
C6EC38
yoaF
B21_01750 ECBD_1852 ECD_01762
Conserved outer membrane protein (Putative uncharacterized protein)
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
 
yes
C5W3H3_ECOBD
C5W3H3
rzoR
B21_01349
Rac prophage; predicted lipoprotein
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
 
yes
C6ECG0_ECOBD
C6ECG0
bsmA

yjfO

B21_04018 ECBD_3845 ECD_04056
Putative uncharacterized protein (Putative uncharacterized protein yjfO)
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
 
yes
C6ECL9_ECOBD
C6ECL9
osmE
B21_01696 ECBD_1906 ECD_01708
DNA-binding transcriptional activator (SmpA/OmlA domain protein)
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
yes
yes
C6ECP9_ECOBD
C6ECP9
nlpC
B21_01666 ECBD_1937 ECD_01677
NLP/P60 protein (Predicted lipoprotein)
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
yes
yes
C5W3T1_ECOBD
C5W3T1
flgH
B21_01083 ECD_01075
Flagellar L-ring protein FlgH; basal-body outer-membrane L (Lipopolysaccharide layer) ring protein, subunit of Flagellar Motor Complex and Flagellum (Flagellar L-ring protein H)
Outer Membrane Lipoprotein
I
Cell outer membrane | Lipid-anchor | Bacterial flagellum basal body
SEC
 
LOL: Localization Of Lipoproteins
 
yes
yes
C6ECX4_ECOBD
C6ECX4
blc
B21_03983 ECBD_3880 ECD_04021
Lipocalin family protein (Outer membrane lipoprotein (Lipocalin))
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
yes
yes
C6ECX6_ECOBD
C6ECX6
ecnB
B21_03981 ECBD_3882 ECD_04019
Entericidin B membrane lipoprotein (Entericidin EcnAB)
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
 
yes
C6ECY1_ECOBD
C6ECY1
yjeI
B21_03976 ECBD_3887 ECD_04014
Putative uncharacterized protein (Putative uncharacterized protein yjeI)
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
yes
yes
C6ED44_ECOBD
C6ED44
yjcP

sdsP

B21_03912 ECBD_3951 ECD_03952
Predicted outer membrane factor of efflux pump (RND efflux system, outer membrane lipoprotein, NodT family)
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
yes
yes
C6ED49_ECOBD
C6ED49
nrfG
B21_03908 ECBD_3956 ECD_03948
Heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG (TPR repeat-containing protein)
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
yes
yes
C6ED74_ECOBD
C6ED74
yidX
B21_03523 ECBD_0007 ECD_03579
Predicted lipoproteinC (Putative uncharacterized protein)
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
 
yes
C6EDK4_ECOBD
C6EDK4
slyB
B21_01601 ECBD_2002 ECD_01611
17 kDa surface antigen (Outer membrane lipoprotein)
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
 
yes
C6EDK6_ECOBD
C6EDK6
 
ECBD_2004
Putative lipoprotein
Outer Membrane Lipoprotein
I
 
SEC
 
LOL: Localization Of Lipoproteins
 
yes
yes
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