STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Exportome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Exportome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
YQEI_ECOLI
Q46942
yqeI
b2847 JW2815
Uncharacterized J domain-containing protein djlB
Nucleoid, Integral Inner Membrane
N, B
IM (predicted)
 
Cytoplasmic
 
SRP
SEC
 
 
no
yes
HCAT_ECOLI
Q47142
hcaT

yfhS

b2536 JW2520
Probable 3-phenylpropionic acid transporter
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
FADE_ECOLI
Q47146
fadE

yafH

b0221 JW5020
Acyl-coenzyme A dehydrogenase (ACDH) (EC 1.3.99.-)
Integral Inner Membrane
B
IM (predicted)
 
Integral Membrane Protein
 
SRP,TF
SEC
 
 
yes
yes
YAFL_ECOLI
Q47151
yafL
b0227 JW0217
Uncharacterized lipoprotein yafL
Periplasmic
G
N/A
Cell membrane | Lipid-anchor
Periplasmic
 
 
SEC
 
 
yes
yes
FHIA_ECOLI
Q47153
fhiA
b0229 JW5811
Putative protein fhiA
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
no
ARNE_ECOLI
Q47377
arnE

pmrL yfbW

b4544 JW2252
Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE (L-Ara4N-phosphoundecaprenol flippase subunit ArnE) (Undecaprenyl phosphate-aminoarabinose flippase subunit ArnE)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YAIP_ECOLI
Q47536
yaiP
b0363 JW0355
Uncharacterized protein ykfM
Integral Inner Membrane
B
IM (predicted)
 
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
TAUA_ECOLI
Q47537
tauA

ssiA yaiR

b0365 JW0357
Taurine-binding periplasmic protein (Sulfate starvation-induced protein 1) (SSI1)
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
TAUC_ECOLI
Q47539
tauC

ssiC yaiJ

b0367 JW0359
Taurine transport system permease protein tauC
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
SAPA_ECOLI
Q47622
sapA
b1294 JW1287
Peptide transport periplasmic protein sapA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
SURA
 
yes
yes
MMUP_ECOLI
Q47689
mmuP

ykfD

b0260 JW5027
Probable S-methylmethionine permease
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
no
UIDC_ECOLI
Q47706
uidC

gusC

b1615 JW1607
Membrane-associated protein uidC
Outer Membrane b-barrel protein
H
N/A
Cell outer membrane
Outer Membrane β-barrel protein (Experimental)
 
 
SEC
 
BAM
no
yes
COPA_ECOLI
Q59385
copA

ybaR

b0484 JW0473
Copper-exporting P-type ATPase A (EC 3.6.3.n1)
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
YidC
 
 
no
yes
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