STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Exportome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Exportome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
YIDG_ECOLI
P0ADL6
yidG
b3675 JW3651
Inner membrane protein yidG
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YIDH_ECOLI
P0ADM0
yidH
b3676 JW3652
Inner membrane protein yidH
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YIDQ_ECOLI
P0ADM4
yidQ
b3688 JW5633
Uncharacterized protein yidQ
Inner Membrane Lipoprotein
E
N/A
 
Outer membrane Lipoprotein(experimental)
 
 
SEC
 
LOL
yes
yes
ZUPT_ECOLI
P0A8H3
zupT

ygiE

b3040 JW3008
Zinc transporter zupT
Integral Inner Membrane
B
IM (predicted)
Cell membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YIHY_ECOLI
P0A8K8
yihY
b3886 JW3857 b2268
UPF0761 membrane protein yihY
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Cytoplasmic
 
SRP
SEC
 
 
yes
yes
FRDC_ECOLI
P0A8Q0
frdC
b4152 JW4113
Fumarate reductase subunit C (Fumarate reductase 15 kDa hydrophobic protein)
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
FRDD_ECOLI
P0A8Q3
frdD
b4151 JW4112
Fumarate reductase subunit D (Fumarate reductase 13 kDa hydrophobic protein)
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YCJF_ECOLI
P0A8R7
ycjF
b1322 JW1315
UPF0283 membrane protein ycjF
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YIDX_ECOLI
P0ADM6
yidX
b3696 JW5858
Uncharacterized protein yidX
Outer Membrane Lipoprotein
I
N/A
Membrane | Single-pass membrane protein
Outer membrane Lipoprotein
 
 
SEC
 
LOL
no
yes
YIFL_ECOLI
P0ADN6
yifL
b4558 JW3781
Uncharacterized lipoprotein yifL
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell membrane | Lipid-anchor
Membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
YGAM_ECOLI
P0ADQ7
ygaM
b2672 JW2647
Uncharacterized protein ygaM
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
 
Membrane anchored
 
SRP
SEC
 
 
no
yes
YCEI_ECOLI
P0A8X2
yceI
b1056 JW1043
Protein yceI
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
BLC_ECOLI
P0A901
blc

yjeL

b4149 JW4110
Outer membrane lipoprotein blc
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
BAMC_ECOLI
P0A903
nlpB

dapX nlpB

b2477 JW2462
Lipoprotein 34
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
SLYB_ECOLI
P0A905
slyB
b1641 JW1633
Outer membrane lipoprotein slyB
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YGDD_ECOLI
P0ADR2
ygdD
b2807 JW2778
UPF0382 inner membrane protein ygdD
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YGGE_ECOLI
P0ADS6
yggE
b2922 JW2889
Uncharacterized protein yggE
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
YGIW_ECOLI
P0ADU5
ygiW
b3024 JW2992
Protein ygiW
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
SECB
SEC
 
 
yes
yes
MIPA_ECOLI
P0A908
mipA

yeaF

b1782 JW1771
MltA-interacting protein
Outer Membrane b-barrel protein
H
N/A
Cell outer membrane
Outer Membrane β-barrel protein (Experimental)
 
 
SEC
 
BAM
yes
yes
OMPA_ECOLI
P0A910
ompA

con tolG tut

b0957 JW0940
Outer membrane protein A (Outer membrane protein II*)
Outer Membrane b-barrel protein
H
Soluble IM Fraction
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
 
TF
SEC
SKP,SURA,DEGP,DSBA
BAM
yes
yes
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