STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Exportome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Exportome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
PAL_ECOLI
P0A912
pal

excC

b0741 JW0731
Peptidoglycan-associated lipoprotein
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
LPTA_ECOLI
P0ADV1
lptA

yhbN

b3200 JW3167
Lipopolysaccharide export system protein lptA
Periplasmic
G
N/A
Periplasm
Periplasmic(experimental)
 
 
SEC
 
 
yes
yes
MLAC_ECOLI
P0ADV7
mlaC

yrbC

b3192 JW3159
Probable phospholipid-binding protein mlaC
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
OMPW_ECOLI
P0A915
ompW

yciD

b1256 JW1248
Outer membrane protein W
Outer Membrane b-barrel protein
H
N/A
Cell outer membrane
Outer Membrane β-barrel protein (Experimental)
 
 
SEC
 
BAM
yes
yes
OMPX_ECOLI
P0A917
ompX

ybiG

b0814 JW0799
Outer membrane protein X
Outer Membrane b-barrel protein
H
Soluble IM Fraction
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
 
SECB,TF
SEC
SURA,SKP
BAM
yes
yes
PA1_ECOLI
P0A921
pldA
b3821 JW3794
Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) (Detergent-resistant phospholipase A) (DR-phospholipase A) (Outer membrane phospholipase A) (OM PLA) (OMPLA) (Phosphatidylcholine 1-acylhydrolase)
Outer Membrane b-barrel protein
H
N/A
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
 
 
SEC
SKP
BAM
yes
yes
YHHA_ECOLI
P0ADX7
yhhA
b3448 JW3413
Uncharacterized protein yhhA (ORFQ)
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
YQAE_ECOLI
P0AE42
yqaE
b2666 JW2641
UPF0057 membrane protein yqaE
Integral Inner Membrane
B
IM (predicted)
Cell membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
CREA_ECOLI
P0AE91
creA

yjjD

b4397 JW4360
Protein creA
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
DSBA
 
yes
yes
YJIG_ECOLI
P0AEH8
yjiG
b4329 JW4292
Inner membrane protein yjiG
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
PGPB_ECOLI
P0A924
pgpB
b1278 JW1270
Phosphatidylglycerophosphatase B (EC 3.1.3.27)
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane proteinCell outer membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
TSX_ECOLI
P0A927
tsx

nupA

b0411 JW0401
Nucleoside-specific channel-forming protein tsx
Outer Membrane b-barrel protein
H
Soluble IM Fraction
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
 
 
SEC
 
BAM
yes
no
WZA_ECOLI
P0A930
wza
b2062 JW2047
Putative polysaccharide export protein wza
Outer Membrane Lipoprotein, Peripheral outer membrane protein facing the extra-cellular space
I, F4
N/A
Cell outer membrane | Multi-pass membrane protein
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
GFCE_ECOLI
P0A932
gfcE

yccZ

b0983 JW0966
Putative polysaccharide export protein gfcE (Group 4 capsule protein E homolog)
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane | Multi-pass membrane protein
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YIIR_ECOLI
P0AF34
yiiR
b3921 JW3892
Uncharacterized protein yiiR
Integral Inner Membrane
B
IM (predicted)
 
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YIJD_ECOLI
P0AF40
yijD
b3964 JW3936
Inner membrane protein yijD
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YJBE_ECOLI
P0AF45
yjbE
b4026 JW3986
Uncharacterized protein yjbE
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
MLTA_ECOLI
P0A935
mltA

mlt ygdM

b2813 JW2784
Membrane-bound lytic murein transglycosylase A (EC 4.2.2.n1) (Mlt38) (Murein hydrolase A)
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
BAME_ECOLI
P0A937
smpA

smpA

b2617 JW2598
Small protein A
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell outer membrane | Lipid-anchor
Outer membrane Lipoprotein
 
 
SEC
 
LOL
yes
yes
BAMA_ECOLI
P0A940
bamA

yaeT yzzN yzzY

b0177 JW0172
Outer membrane protein assembly factor yaeT (Omp85)
Outer Membrane b-barrel protein
H
Soluble IM Fraction
Cell outer membrane
Outer Membrane ss-barrel protein(experimental)
 
 
SEC
 
BAM
yes
yes
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