STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Exportome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Exportome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
TOLB_ECOLI
P0A855
tolB
b0740 JW5100
periplasmic & peripheral OM protein (SEC through IM), Tol-Pal system TolB
Periplasmic, Peripheral outer membrane protein facing the periplasm
G, F3
Soluble IM Fraction
Periplasm
Periplasmic (Experimental)
 
SECB, SRP
SEC
 
 
no
yes
YBIS_ECOLI
P0AAX8
ybiS
b0819 JW0803
periplasmic peripheral OM protein (SEC through IM), Probable L,D-transpeptidase YbiS
Peripheral outer membrane protein facing the periplasm
F3
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
SURA
 
yes
yes
BHSA_ECOLI
P0AB40
bhsA

comC ycfR

b1112 JW1098
periplasmic peripheral OM protein (SEC through IM), Multiple stress resistance BhsA
Peripheral outer membrane protein facing the periplasm
F3
N/A
Cell outer membrane
Periplasmic
 
 
SEC
 
 
yes
yes
MLTF_ECOLI
P0AGC5
mltF

yfhD

b2558 JW2542
periplasmic peripheral OM protein (SEC through IM), Membrane-bound lytic murein transglycosylase F MltF
Peripheral outer membrane protein facing the periplasm
F3
N/A
Cell outer membrane
Periplasmic
 
 
SEC
 
 
no
yes
YCBB_ECOLI
P22525
ycbB
b0925 JW0908
periplasmic peripheral OM protein (SEC through IM), Probable L,D-transpeptidase YcbB
Peripheral outer membrane protein facing the periplasm
F3
N/A
Membrane
Periplasmic
 
 
SEC
 
 
yes
yes
ERFK_ECOLI
P39176
erfK

yeeG yzzT

b1990 JW1968
periplasmic peripheral OM protein (SEC through IM), Probable L,D-transpeptidase ErfK
Peripheral outer membrane protein facing the periplasm
F3
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
SURA
 
yes
yes
YCFS_ECOLI
P75954
ycfS
b1113 JW5820
periplasmic peripheral OM protein (SEC through IM), Probable L,D-transpeptidase YcfS
Peripheral outer membrane protein facing the periplasm
F3
N/A
Periplasm
Periplasmic
 
 
SEC
SURA
 
yes
yes
YNFB_ECOLI
P76170
ynfB
b1583 JW1575
periplasmic peripheral OM protein (SEC through IM), UPF0482 YnfB
Peripheral outer membrane protein facing the periplasm
F3
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
YNHG_ECOLI
P76193
ynhG
b1678 JW1668
periplasmic peripheral OM protein (SEC through IM), Probable L,D-transpeptidase YnhG
Peripheral outer membrane protein facing the periplasm
F3
N/A
Periplasm
Periplasmic
 
 
SEC
SURA
 
yes
yes
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