STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Disulfideome of E.coli K-12 (MG1655) proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

 Search
    

Disulfideome of E.coli K-12 (MG1655) proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
OPPA_ECOLI
P23843
oppA
b1243 JW1235
periplasmic protein (SEC through IM), oligopeptide-binding protein OppA
Periplasmic
G
Soluble IM Fraction
Periplasm
Periplasmic (Experimental)
 
SECB
SEC
 
 
yes
yes
DPPA_ECOLI
P23847
dppA
b3544 JW3513
periplasmic protein (SEC through IM), dipeptide transport DppA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA,SKP
 
yes
yes
PSPE_ECOLI
P23857
pspE
b1308 JW1301
periplasmic protein (SEC through IM), Thiosulfate sulfurtransferase PspE
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
no
AMY1_ECOLI
P25718
malS
b3571 JW3543
periplasmic protein (SEC through IM), alpha-amylase MalS
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
END1_ECOLI
P25736
endA
b2945 JW2912
periplasmic protein (SEC through IM), Endonuclease-1 EndA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA
 
no
yes
MNMA_ECOLI
P25745
mnmA

asuE trmU ycfB

b1133 JW1119
cytoplasmic protein, tRNA-specific 2-thiouridylase MnmA
Cytoplasmic
A
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
LOIP_ECOLI
P25894
loiP

yggG

b2936 JW2903
OM lipoprotein (SEC through IM), inserted in OM by LOL), Metalloprotease LoiP
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane
Outer membrane Lipoprotein
 
 
SEC
 
LOL
yes
yes
MLIC_ECOLI
P28224
mliC

ydhA

b1639 JW1631
OM lipoprotein (SEC through IM), inserted in OM by LOL), Membrane-bound lysozyme inhibitor of C-type lysozyme MliC
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane
Outer membrane Lipoprotein
 
 
SEC
 
LOL
yes
yes
FIMD_ECOLI
P30130
fimD
b4317 JW5780
Fimbrial OM b-barrel protein (SEC through IM, chaperone usher export system in OM), FimD
Outer Membrane b-barrel protein
H
N/A
Cell outer membrane
Outer Membrane ??-barrel protein (Experimental)
fimbriae
 
SEC
 
CU
yes
yes
THIC_ECOLI
P30136
thiC
b3994 JW3958
cytoplasmic protein, Phosphomethylpyrimidine synthase ThiC
Cytoplasmic
A
IM (predicted-detected)
 
Cytoplasmic
 
 
 
 
 
yes
yes
ARTI_ECOLI
P30859
artI
b0863 JW0847
periplasmic protein (SEC through IM), Putative ABC transporter arginine-binding 2 ArtI
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
ARTJ_ECOLI
P30860
artJ
b0860 JW0844
periplasmic protein (SEC through IM), ABC transporter arginine-binding 1 ArtJ
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA
 
yes
yes
YEDD_ECOLI
P31063
yedD
b1928 JW1913
OM lipoprotein (SEC through IM, inserted in OM by LOL), YedD
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
DSBA
LOL
no
yes
DGCZ_ECOLI
P31129
dgcZ

ydeG ydeH

b1535 JW1528
cytoplasmic protein, Diguanylate cyclase DgcZ
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
POTF_ECOLI
P31133
potF
b0854 JW0838
periplasmic protein (SEC through IM), Putrescine-binding periplasmic protein PotF
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
THIB_ECOLI
P31550
thiB

tbpA yabL

b0068 JW0067
periplasmic protein (SEC through IM), Thiamine-binding periplasmic protein ThiB
Periplasmic
G
N/A
Periplasm
Periplasmic
 
 
SEC
SURA
 
no
yes
LPTD_ECOLI
P31554
lptD

imp ostA yabG

b0054 JW0053
OM b-barrel protein (SEC through IM, inserted in OM by BAM), LPS-assembly LptD
Outer Membrane b-barrel protein
H
Soluble IM Fraction
Cell outer membrane
Outer Membrane ??-barrel protein (Experimental)
 
 
SEC
DSBA,DSBC,SURA,SKP
BAM
yes
yes
RHAB_ECOLI
P32171
rhaB
b3904 JW3875
cytoplasmic protein, L-Rhamnulokinase RhaB
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
HTRE_ECOLI
P33129
htrE
b0139 JW0135
Fimbrial OM b-barrel protein (SEC through IM, inserted in OM by BAM), HtrE
Outer Membrane b-barrel protein
H
N/A
Cell outer membrane
Outer Membrane ??-barrel protein
fimbriae
 
SEC
 
BAM
no
yes
YEBF_ECOLI
P33219
yebF
b1847 JW1836
extra-cellular protein (SEC through IM, secreted in OMV), YebF
Extra-cellular
X
N/A
Secreted
Secreted and released (Experimental)
 
 
SEC
 
OMV
no
yes
First  Previous  1  2  3  4  5  6  7  8  9  10  11  Next  Last       Records 121 to 140 of 207     
Page Size 

 

 ©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: February 2019.