STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Disulfideome of E.coli K-12 (MG1655) proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Disulfideome of E.coli K-12 (MG1655) proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
YEHB_ECOLI
P33341
yehB
b2109 JW2096
Fimbrial OM b-barrel protein (SEC through IM, inserted in OM by BAM), YehB
Outer Membrane b-barrel protein
H
N/A
Cell outer membrane
Outer Membrane ??-barrel protein
fimbriae
 
SEC
 
BAM
no
yes
YEHD_ECOLI
P33343
yehD
b2111 JW2098
Fimbrial periplasmic protein (SEC through IM), YehD
Periplasmic
G
N/A
 
Periplasmic
fimbriae
 
SEC
 
 
no
yes
NAPA_ECOLI
P33937
napA

yojC yojD yojE

b2206 JW2194
periplasmic protein (TAT through IM), nitrate reductase NapA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT
 
 
yes
yes
AHPF_ECOLI
P35340
ahpF
b0606 JW0599
cytoplasmic peripheral IM protein, Alkyl hydroperoxide reductase subunit F AhpF
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
yes
yes
DSBD_ECOLI
P36655
dsbD

cutA2 cycZ dipZ

b4136 JW5734
integral IM protein (SEC in IM), Thiol:disulfide interchange DsbD
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
ACNB_ECOLI
P36683
acnB

yacI yacJ

b0118 JW0114
cytoplasmic peripheral IM protein, Aconitate hydratase B AcnB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic (Experimental)
 
TF
 
 
 
yes
yes
RLMN_ECOLI
P36979
rlmN

yfgB

b2517 JW2501
cytoplasmic protein, Dual-specificity RNA methyltransferase RlmN
Cytoplasmic
A
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
BTUF_ECOLI
P37028
btuF

yadT

b0158 JW0154
periplasmic protein (SEC through IM), Vitamin B12-binding protein BtuF
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
YADN_ECOLI
P37050
yadN
b0141 JW0137
Fimbrial periplasmic protein (SEC through IM), YadN
Periplasmic
G
N/A
Fimbrium
Periplasmic
fimbriae
 
SEC
 
CU
no
yes
PTKB_ECOLI
P37188
gatB
b2093 JW2077
cytoplasmic peripheral IM protein, PTS system galactitol-specific EIIB component GatB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
no
yes
YHJJ_ECOLI
P37648
yhjJ
b3527 JW3495
periplasmic protein (SEC through IM), YhjJ
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
SKP
 
yes
yes
EPTB_ECOLI
P37661
eptB

yhjW

b3546 JW5660
integral IM protein (SEC in IM), EptB
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
YIBQ_ECOLI
P37691
yibQ
b3614 JW5645
periplasmic protein (SEC through IM), YibQ
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
WBBK_ECOLI
P37751
wbbK

yefI

b2032 JW2017
cytoplasmic peripheral IM protein, Putative glycosyltransferase WbbK
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cell inner membrane
Cytoplasmic
 
 
 
 
 
no
yes
GLTI_ECOLI
P37902
gltI

ybeJ yzzK

b0655 JW5092
periplasmic protein (SEC through IM), Glutamate/aspartate import solute-binding protein GltI
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA
 
yes
yes
YBGD_ECOLI
P37909
ybgD
b0719 JW0709
Fimbrial periplasmic protein (SEC through IM), YbgD
Periplasmic
G
N/A
Fimbrium
Periplasmic
fimbriae
 
SEC
 
CU
no
yes
SFMF_ECOLI
P38052
sfmF

ybcG

b0534 JW5072
Fimbrial periplasmic protein (SEC through IM), SfmF
Periplasmic
G
N/A
Fimbrium
Periplasmic
fimbriae
 
SEC
 
CU
no
yes
TORT_ECOLI
P38683
torT

yccH

b0994 JW0979
periplasmic protein (SEC through IM), Periplasmic TorT
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
SRP (exp)
SEC
 
 
yes
yes
ZNUA_ECOLI
P39172
znuA

yebL yzzP

b1857 JW5831
periplasmic protein (SEC through IM), High-affinity zinc uptake system ZnuA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
FIMI_ECOLI
P39264
fimI
b4315 JW5779
Fimbrial periplasmic protein (SEC through IM), Fimbrin-like FimI
Periplasmic
G
N/A
Fimbrium
Periplasmic
fimbriae
 
SEC
 
CU
no
yes
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