STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Disulfideome of E.coli K-12 (MG1655) proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Disulfideome of E.coli K-12 (MG1655) proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
BTUE_ECOLI
P06610
btuE
b1710 JW1700
cytoplasmic protein, Thioredoxin/glutathione peroxidase BtuE
Cytoplasmic
A
N/A
Periplasm
Cytoplasmic
 
 
 
 
 
yes
yes
GSHR_ECOLI
P06715
gor
b3500 JW3467
cytoplasmic protein, Glutathione reductase Gor
Cytoplasmic
A
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
FHUA_ECOLI
P06971
fhuA

tonA

b0150 JW0146
OM b-barrel protein (SEC through IM, inserted in OM by BAM), Ferrichrome transporter/phage receptor FhuA
Outer Membrane b-barrel protein
H
N/A
Cell outer membrane
Outer Membrane ??-barrel protein (Experimental)
 
SECB
SEC
SURA,SKP
BAM
yes
yes
NRDH_ECOLI
P0AC65
nrdH

ygaN

b2673 JW2648
cytoplasmic protein, Glutaredoxin-like NrdH NrdH
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
YDCA_ECOLI
P0ACW4
ydcA
b1419 JW1416
periplasmic protein (SEC through IM), YdcA
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
USHA_ECOLI
P07024
ushA
b0480 JW0469
periplasmic protein (SEC through IM), UshA
Periplasmic
G
Soluble IM Fraction
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
PPA_ECOLI
P07102
appA
b0980 JW0963
periplasmic protein (SEC through IM), AppA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBC
 
yes
yes
TDH_ECOLI
P07913
tdh
b3616 JW3591
cytoplasmic protein, L-threonine 3-dehydrogenase Tdh
Cytoplasmic
A
IM (predicted)
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
ILVB_ECOLI
P08142
ilvB
b3671 JW3646
cytoplasmic protein, Acetolactate synthase isozyme 1 large subunit IlvB
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
YHEV_ECOLI
P0ADW8
yheV
b4551 JW3312
cytoplasmic protein, YheV
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
BCP_ECOLI
P0AE52
bcp
b2480 JW2465
cytoplasmic protein, Peroxiredoxin Bcp
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
CREA_ECOLI
P0AE91
creA

yjjD

b4397 JW4360
periplasmic protein (SEC through IM), CreA
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
DSBA
 
yes
yes
FIMF_ECOLI
P08189
fimF
b4318 JW4281
Fimbrial extra-cellular peripheral OM protein (SEC through IM, chaperone usher export system over OM), FimF
Peripheral outer membrane protein facing the extra-cellular space
F4
N/A
Fimbrium
Cell surface appendage (Experimental)
fimbriae
 
SEC
 
CU
no
yes
FIMG_ECOLI
P08190
fimG
b4319 JW4282
Fimbrial extra-cellular peripheral OM protein (SEC through IM, chaperone usher export system over OM), FimG
Peripheral outer membrane protein facing the extra-cellular space
F4
N/A
Fimbrium
Cell surface appendage (Experimental)
fimbriae
 
SEC
 
CU
no
yes
FOLC_ECOLI
P08192
folC

dedC

b2315 JW2312
cytoplasmic protein, Dihydrofolate synthase/folylpolyglutamate synthase FolC
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
CPDB_ECOLI
P08331
cpdB
b4213 JW4171
periplasmic protein (SEC through IM), 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase CpdB
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
SURA
 
no
yes
PSIF_ECOLI
P0AFM4
psiF
b0384 JW5054
periplasmic protein (SEC through IM), Phosphate starvation-inducible PsiF
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
YJJA_ECOLI
P18390
yjjA
b4360 JW5795
periplasmic protein (SEC through IM), YjjA
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
YEBY_ECOLI
P64506
yebY
b1839 JW1828
periplasmic protein (SEC through IM), YebY
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
DSBA
 
yes
yes
AK3_ECOLI
P08660
lysC

apk

b4024 JW3984
cytoplasmic protein, Lysine-sensitive aspartokinase 3 LysC
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
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