STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Disulfideome of E.coli K-12 (MG1655) proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Disulfideome of E.coli K-12 (MG1655) proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
PT1_ECOLI
P08839
ptsI
b2416 JW2409
cytoplasmic peripheral IM protein, Phosphoenolpyruvate-phosphotransferase PtsI
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
ARGT_ECOLI
P09551
argT
b2310 JW2307
periplasmic protein (SEC through IM), Lysine/arginine/ornithine-binding periplasmic ArgT
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
GLTB_ECOLI
P09831
gltB

aspB

b3212 JW3179
cytoplasmic peripheral IM protein, Glutamate synthase (NADPH) large chain GltB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
YFIR_ECOLI
P64548
yfiR
b2603 JW2584
periplasmic protein (SEC through IM), YfiR
Periplasmic
G
N/A
Periplasm
Periplasmic
 
 
SEC
 
 
yes
yes
LEUC_ECOLI
P0A6A6
leuC
b0072 JW0071
cytoplasmic protein, 3-isopropylmalate dehydratase large subunit LeuC
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
DAPF_ECOLI
P0A6K1
dapF
b3809 JW5592
cytoplasmic protein, Diaminopimelate epimerase DapF
Cytoplasmic
A
IM (predicted)
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
DSBB_ECOLI
P0A6M2
dsbB

roxB ycgA

b1185 JW5182
integral IM protein (SEC-YidC in IM), Disulfide bond formation B DsbB
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC-YidC
 
 
yes
yes
FLGI_ECOLI
P0A6S3
flgI

fla FIX flaM

b1080 JW1067
Flagellar periplasmic protein (SEC through IM), P-ring FlgI
Periplasmic
G
N/A
Periplasm Bacterial flagellum basal body
Periplasmic (Experimental)
flagellum
SRP (exp)
SEC
DSBA
Fla
no
yes
GLRX1_ECOLI
P68688
grxA

grx

b0849 JW0833
cytoplasmic protein, Glutaredoxin 1 GrxA
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
YCGJ_ECOLI
P76001
ycgJ
b1177 JW1166
periplasmic protein (SEC through IM), YcgJ
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
YNJH_ECOLI
P76227
ynjH
b1760 JW1749
periplasmic protein (SEC through IM), YnjH
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
GSH1_ECOLI
P0A6W9
gshA

gsh-I

b2688 JW2663
cytoplasmic protein, Glutamate--cysteine ligase GshA
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
HSLO_ECOLI
P0A6Y5
hslO

yrfI

b3401 JW5692
cytoplasmic peripheral IM protein, 33 kDa chaperonin HslO
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
IM (predicted)
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
MSRA_ECOLI
P0A744
msrA

pms

b4219 JW4178
cytoplasmic protein, Peptide methionine sulfoxide reductase MsrA
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
MSRB_ECOLI
P0A746
msrB

yeaA

b1778 JW1767
cytoplasmic protein, Peptide methionine sulfoxide reductase MsrB
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
NAGB_ECOLI
P0A759
nagB

glmD

b0678 JW0664
cytoplasmic peripheral IM protein, Glucosamine-6-phosphate deaminase NagB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
IM (predicted)
 
Cytoplasmic
 
 
 
 
 
yes
yes
MSRC_ECOLI
P76270
msrC

yebR

b1832 JW1821
cytoplasmic protein, Free methionine-R-sulfoxide reductase MsrC
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
FLHE_ECOLI
P76297
flhE
b1878 JW1867
periplasmic protein (SEC through IM), FlhE
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
Fla
yes
yes
YKFB_ECOLI
P77162
ykfB
b0250 JW0239
periplasmic protein (SEC through IM), YkfB
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
no
PYRI_ECOLI
P0A7F3
pyrI
b4244 JW4203
cytoplasmic protein, Aspartate carbamoyltransferase regulatory chain PyrI
Cytoplasmic
A
N/A
 
Cytoplasmic (Experimental)
 
 
 
 
 
yes
yes
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