STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Disulfideome of E.coli K-12 (MG1655) proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Disulfideome of E.coli K-12 (MG1655) proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
SFMA_ECOLI
P0ABW5
sfmA
b0530 JW0519
Fimbrial periplasmic protein (SEC through IM), SfmA
Periplasmic
G
N/A
Fimbrium
Periplasmic
fimbriae
 
SEC
 
CU
yes
yes
FUMA_ECOLI
P0AC33
fumA
b1612 JW1604
cytoplasmic peripheral IM protein, Fumarate hydratase class I, aerobic FumA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
GLRX2_ECOLI
P0AC59
grxB
b1064 JW1051
cytoplasmic protein, Glutaredoxin 2 GrxB
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
GLRX3_ECOLI
P0AC62
grxC

yibM

b3610 JW3585
cytoplasmic peripheral IM protein, Glutaredoxin 3 GrxC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
ISCU_ECOLI
P0ACD4
iscU

nifU yfhN

b2529 JW2513
cytoplasmic peripheral IM protein, Iron-sulfur cluster assembly scaffold IscU
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
MBHM_ECOLI
P0ACE0
hybC
b2994 JW2962
periplasmic peripheral IM protein (TAT via piggyback through IM), Hydrogenase-2 large chain HybC
Peripheral inner membrane protein facing the periplasm
F2
Soluble IM Fraction
Cell membrane; Peripheral membrane protein
Periplasmic (Experimental)
 
 
TAT (piggyback)
 
 
yes
yes
OXYR_ECOLI
P0ACQ4
oxyR

momR mor

b3961 JW3933
nucleoid protein, Hydrogen peroxide-inducible genes activator OxyR
Cytoplasmic, Nucleoid
A, N
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
yes
yes
IVY_ECOLI
P0AD59
ivy

ykfE

b0220 JW0210
periplasmic protein (SEC through IM), Inhibitor of vertebrate lysozyme Ivy
Periplasmic
G
Soluble IM Fraction
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
AMPH_ECOLI
P0AD70
ampH

yaiH

b0376 JW5052
cytoplasmic peripheral IM protein (SEC through IM), D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell inner membrane
Periplasmic
 
 
 
SURA
 
yes
yes
LIVJ_ECOLI
P0AD96
livJ
b3460 JW3425
periplasmic protein (SEC through IM), Leu/Ile/Val-binding LivJ
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA
 
yes
yes
OSME_ECOLI
P0ADB1
osmE

anr

b1739 JW1728
OM lipoprotein (SEC through IM), inserted in OM by LOL), Osmotically-inducible putative OsmE
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell inner membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YGGN_ECOLI
P0ADS9
yggN
b2958 JW2925
periplasmic protein (SEC through IM), YggN
Periplasmic
G
N/A
 
Periplasmic(experimental)
 
 
SEC
DSBA
 
yes
yes
YGIB_ECOLI
P0ADT2
ygiB
b3037 JW5927
cytoplasmic peripheral IM protein, UPF0441 YgiB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
yes
yes
AHPC_ECOLI
P0AE08
ahpC
b0605 JW0598
cytoplasmic peripheral IM protein, Alkyl hydroperoxide reductase C AhpC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
DSBA_ECOLI
P0AEG4
dsbA

dsf ppfA

b3860 JW3832
periplasmic protein (SEC through IM), Thiol:disulfide interchange DsbA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
SRP (exp)
SEC
 
 
yes
yes
DSBC_ECOLI
P0AEG6
dsbC

xprA

b2893 JW2861
periplasmic protein (SEC through IM), Thiol:disulfide interchange DsbC
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
HDEA_ECOLI
P0AES9
hdeA

yhhC yhiB

b3510 JW3478
periplasmic protein (SEC through IM), Acid stress chaperone HdeA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
YfgM
 
yes
yes
HDEB_ECOLI
P0AET2
hdeB

yhhD yhiC

b3509 JW5669
periplasmic protein (SEC through IM), Acid stress chaperone HdeB
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
YfgM
 
yes
yes
HDHA_ECOLI
P0AET8
hdhA

hsdH

b1619 JW1611
cytoplasmic protein, 7-alpha-hydroxysteroid dehydrogenase HdhA
Cytoplasmic
A
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
HISJ_ECOLI
P0AEU0
hisJ
b2309 JW2306
periplasmic protein (SEC through IM), Histidine-binding periplasmic HisJ
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA
 
yes
yes
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