STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
PDXA_ECOLI
P19624
pdxA
b0052 JW0051
4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) (4-(phosphohydroxy)-L-threonine dehydrogenase)
Cytoplasmic
A
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
MTNN_ECOLI
P0AF12
mtnN

mtn pfs yadA

b0159 JW0155
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (MTA/SAH nucleosidase) (MTAN) (EC 3.2.2.9) (5'-methylthioadenosine nucleosidase) (MTA nucleosidase) (P46) (S-adenosylhomocysteine nucleosidase) (AdoHcy nucleosidase) (SAH nucleosidase) (SRH nucleo
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
5DNU_ECOLI
P76491
yfbR
b2291 JW2288
5'-nucleotidase yfbR (EC 3.1.3.5) (5'-deoxyribonucleotidase) (Nucleoside 5'-monophosphate phosphohydrolase)
Cytoplasmic
A
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
YJJG_ECOLI
P0A8Y1
yjjG
b4374 JW4336
5'-nucleotidase yjjG (EC 3.1.3.5) (Nucleoside 5'-monophosphate phosphohydrolase)
Cytoplasmic
A
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
METF_ECOLI
P0AEZ1
metF
b3941 JW3913
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
HIUH_ECOLI
P76341
hiuH

yedX

b1970 JW1953
5-hydroxyisourate hydrolase (HIU hydrolase) (HIUHase) (EC 3.5.2.17) (Transthyretin-like protein) (TLP) (Transthyretin-related protein) (TRP)
Periplasmic
G
Secreted
Periplasmic
N/A
 
 
SEC
 
 
yes
yes
GARL_ECOLI
P23522
garL

yhaF

b3126 JW3095
5-keto-4-deoxy-D-glucarate aldolase (KDGluc aldolase) (KDGlucA) (EC 4.1.2.20) (2-dehydro-3-deoxy-D-glucarate aldolase) (2-keto-3-deoxy-D-glucarate aldolase) (5-dehydro-4-deoxy-D-glucarate aldolase) (Alpha-keto-beta-deoxy-D-glucarate aldolase)
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
MCRA_ECOLI
P24200
mcrA

rglA

b1159 JW1145
5-methylcytosine-specific restriction enzyme A (EC 3.1.21.-) (EcoKMcrA)
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
no
no
MCRB_ECOLI
P15005
mcrB

rglB

b4346 JW5871
5-methylcytosine-specific restriction enzyme B (EC 3.1.21.-) (EcoKMcrBC)
Nucleoid
N
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
METE_ECOLI
P25665
metE
b3829 JW3805
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
RL1_ECOLI
P0A7L0
rplA
b3984 JW3947
50S ribosomal protein L1
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
RL10_ECOLI
P0A7J3
rplJ
b3985 JW3948
50S ribosomal protein L10 (50S ribosomal protein L8)
Ribosomal
r
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
RL11_ECOLI
P0A7J7
rplK

relC

b3983 JW3946
50S ribosomal protein L11
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
RL13_ECOLI
P0AA10
rplM
b3231 JW3200
50S ribosomal protein L13
Ribosomal
r
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
RL14_ECOLI
P0ADY3
rplN
b3310 JW3272
50S ribosomal protein L14
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
RL15_ECOLI
P02413
rplO
b3301 JW3263
50S ribosomal protein L15
Ribosomal
r
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
RL16_ECOLI
P0ADY7
rplP
b3313 JW3275
50S ribosomal protein L16
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
RL17_ECOLI
P0AG44
rplQ
b3294 JW3256
50S ribosomal protein L17
Ribosomal
r
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
RL18_ECOLI
P0C018
rplR
b3304 JW3266
50S ribosomal protein L18
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
RL19_ECOLI
P0A7K6
rplS
b2606 JW2587
50S ribosomal protein L19
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
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