STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
ADPP_ECOLI
Q93K97
nudF

aspP yqiE yzzG

b3034 JW3002
cytoplasmic peripheral IM protein, ADP-ribose pyrophosphatase NudF
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
Soluble IM Fraction +
 
 
 
 
 
yes
yes
GLPD_ECOLI
P13035
glpD

glyD

b3426 JW3389
cytoplasmic peripheral IM protein, Aerobic glycerol-3-phosphate dehydrogenase GlpD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
ALR2_ECOLI
P29012
dadX

alnB dadB

b1190 JW1179
cytoplasmic peripheral IM protein, Alanine racemase, catabolic DadX
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
YQHD_ECOLI
Q46856
yqhD
b3011 JW2978
cytoplasmic peripheral IM protein, Alcohol dehydrogenase YqhD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ADHP_ECOLI
P39451
adhP

yddN

b1478 JW1474
cytoplasmic peripheral IM protein, Alcohol dehydrogenase, propanol-preferring AdhP
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
IM (predicted-detected)
 
 
 
 
 
yes
yes
YAHK_ECOLI
P75691
yahK
b0325 JW0317
cytoplasmic peripheral IM protein, Aldehyde reductase YahK
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
IM (predicted-detected)
 
 
 
 
 
no
yes
ADHE_ECOLI
P0A9Q7
adhE

ana

b1241 JW1228
cytoplasmic peripheral IM protein, Aldehyde-alcohol dehydrogenase AdhE
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
TF
 
 
 
yes
yes
SSUB_ECOLI
P0AAI1
ssuB

ycbE

b0933 JW0916
cytoplasmic peripheral IM protein, Aliphatic sulfonates import ATP-binding SsuB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
AHPC_ECOLI
P0AE08
ahpC
b0605 JW0598
cytoplasmic peripheral IM protein, Alkyl hydroperoxide reductase C AhpC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
AHPF_ECOLI
P35340
ahpF
b0606 JW0599
cytoplasmic peripheral IM protein, Alkyl hydroperoxide reductase subunit F AhpF
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
PHNL_ECOLI
P16679
phnL
b4096 JW4057
cytoplasmic peripheral IM protein, Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
UXAA_ECOLI
P42604
uxaA

ygjW

b3091 JW3062
cytoplasmic peripheral IM protein, Altronate dehydratase UxaA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
IM (predicted-detected)
 
 
 
 
 
yes
yes
PUR1_ECOLI
P0AG16
purF
b2312 JW2309
cytoplasmic peripheral IM protein, Amidophosphoribosyltransferase PurF
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
YHDZ_ECOLI
P45769
yhdZ
b3271 JW3239
cytoplasmic peripheral IM protein, amino-acid ABC transporter ATP-binding YhdZ
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
GCST_ECOLI
P27248
gcvT
b2905 JW2873
cytoplasmic peripheral IM protein, Aminomethyltransferase GcvT
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
AMPN_ECOLI
P04825
pepN
b0932 JW0915
cytoplasmic peripheral IM protein, Aminopeptidase PepN
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side
Cytoplasmic (Experimental)
N/A
 
 
 
 
 
yes
yes
GLPA_ECOLI
P0A9C0
glpA
b2241 JW2235
cytoplasmic peripheral IM protein, Anaerobic glycerol-3-phosphate dehydrogenase subunit A GlpA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane; Peripheral membrane protein
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
GLPB_ECOLI
P13033
glpB
b2242 JW2236
cytoplasmic peripheral IM protein, Anaerobic glycerol-3-phosphate dehydrogenase subunit B GlpB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane; Peripheral membrane protein
Cytoplasmic (Experimental)
IM (predicted)
 
 
 
 
 
yes
yes
GLPC_ECOLI
P0A996
glpC
b2243 JW2237
cytoplasmic peripheral IM protein, Anaerobic glycerol-3-phosphate dehydrogenase subunit C GlpC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane; Peripheral membrane protein
Membrane associated (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
TRPE_ECOLI
P00895
trpE
b1264 JW1256
cytoplasmic peripheral IM protein, Anthranilate synthase component 1 TrpE
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
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