STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
ATOB_ECOLI
P76461
atoB
b2224 JW2218
Acetyl-CoA acetyltransferase (EC 2.3.1.9) (Acetoacetyl-CoA thiolase)
Cytoplasmic
A
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ACCA_ECOLI
P0ABD5
accA
b0185 JW0180
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (ACCase subunit alpha) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (EC 6.4.1.2)
Peripheral inner membrane protein facing the cytoplasm
F1
Cytoplasm
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
ACCD_ECOLI
P0A9Q5
accD

dedB usg

b2316 JW2313
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 6.4.1.2)
Peripheral inner membrane protein facing the cytoplasm
F1
Cytoplasm
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
ACSA_ECOLI
P27550
acs

yfaC

b4069 JW4030
Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA ligase) (Acyl-activating enzyme)
Peripheral inner membrane protein facing the cytoplasm
F1
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ARGB_ECOLI
P0A6C8
argB
b3959 JW5553
Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
Peripheral inner membrane protein facing the cytoplasm
F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ARGE_ECOLI
P23908
argE
b3957 JW3929
Acetylornithine deacetylase (AO) (Acetylornithinase) (EC 3.5.1.16) (N-acetylornithinase) (NAO)
Peripheral inner membrane protein facing the cytoplasm
F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ARGD_ECOLI
P18335
argD

dapC dtu

b3359 JW3322
Acetylornithine/succinyldiaminopimelate aminotransferase (ACOAT) (DapATase) (Succinyldiaminopimelate transferase) (EC 2.6.1.11) (EC 2.6.1.17)
Cytoplasmic
A
Cytoplasm
Cytoplasmic
N/A
 
TF
 
 
 
yes
yes
YPEA_ECOLI
P76539
ypeA
b2434 JW2427
Acetyltransferase ypeA (EC 2.3.1.-)
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ASR_ECOLI
P36560
asr
b1597 JW5826
Acid shock protein
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
 
 
SEC
 
 
no
yes
MSYB_ECOLI
P25738
msyB
b1051 JW1039
Acidic protein msyB
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ACON1_ECOLI
P25516
acnA

acn

b1276 JW1268
Aconitate hydratase 1 (Aconitase 1) (EC 4.2.1.3) (Citrate hydro-lyase 1)
Cytoplasmic
A
 
Cytoplasmic (Experimental)
N/A
 
 
 
 
 
no
yes
ACNB_ECOLI
P36683
acnB

yacI yacJ

b0118 JW0114
Aconitate hydratase 2 (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)
Peripheral inner membrane protein facing the cytoplasm
F1
 
Cytoplasmic (Experimental)
N/A
 
TF
 
 
 
yes
yes
ACRA_ECOLI
P0AE06
acrA

lir mtcA

b0463 JW0452
Acriflavine resistance protein A
Inner Membrane Lipoprotein
E
Cell inner membrane | Lipid-anchor
Inner membrane lipoprotein (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
 
SEC
 
LOL: Localization Of Lipoproteins
yes
yes
ACRB_ECOLI
P31224
acrB

acrE

b0462 JW0451
Acriflavine resistance protein B
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted), Detected in IM Fraction
 
SRP (exp)
YidC
 
 
yes
yes
ACRE_ECOLI
P24180
acrE

envC

b3265 JW3233
Acriflavine resistance protein E (Protein envC)
Inner Membrane Lipoprotein
E
Cell inner membrane | Lipid-anchor
Inner membrane lipoprotein
N/A
 
 
SEC
 
LOL: Localization Of Lipoproteins
yes
yes
ACRF_ECOLI
P24181
acrF

envD

b3266 JW3234
Acriflavine resistance protein F (Protein envD)
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted)
 
SRP
SEC
 
 
yes
yes
ACP_ECOLI
P0A6A8
acpP
b1094 JW1080
Acyl carrier protein (ACP) (Cytosolic-activating factor) (CAF) (Fatty acid synthase acyl carrier protein)
Peripheral inner membrane protein facing the cytoplasm
F1
Cytoplasm
Cytoplasmic (Experimental)
N/A
 
 
 
 
 
no
yes
ACPH_ECOLI
P21515
acpH

yajB

b0404 JW0394
Acyl carrier protein phosphodiesterase (ACP phosphodiesterase) (EC 3.1.4.14)
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
YBGC_ECOLI
P0A8Z3
ybgC
b0736 JW0726
Acyl-CoA thioester hydrolase YbgC (Acyl-CoA thioesterase) (EC 3.1.2.-)
Peripheral inner membrane protein facing the cytoplasm
F1
Cell inner membrane | Peripheral membrane protein | Cytoplasmic side
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
YCIA_ECOLI
P0A8Z0
yciA
b1253 JW1245
Acyl-CoA thioester hydrolase yciA (EC 3.1.2.-) (Protein P14)
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
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