STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
AQPZ_ECOLI
P60844
aqpZ

bniP

b0875 JW0859
Aquaporin Z (Bacterial nodulin-like intrinsic protein)
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted)
 
SRP
YidC
 
 
yes
yes
KDSD_ECOLI
P45395
kdsD

yrbH

b3197 JW3164
Arabinose 5-phosphate isomerase (EC 5.3.1.13)
Cytoplasmic
A
 
Cytoplasmic
IM (predicted)
 
 
 
 
 
yes
yes
ARAG_ECOLI
P0AAF3
araG
b1900 JW1888
Arabinose import ATP-binding protein AraG (EC 3.6.3.17)
Peripheral inner membrane protein facing the cytoplasm
F1
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ARAC_ECOLI
P0A9E0
araC
b0064 JW0063
Arabinose operon regulatory protein
Nucleoid
N
Cytoplasm.
Cytoplasmic
N/A
 
 
 
 
 
no
yes
ARAE_ECOLI
P0AE24
araE
b2841 JW2809
Arabinose-proton symporter (Arabinose transporter)
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted)
 
SRP
YidC
 
 
yes
yes
ARTM_ECOLI
P0AE30
artM
b0861 JW0845
Arginine ABC transporter permease protein ArtM
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted)
 
SRP
YidC
 
 
yes
yes
ARTQ_ECOLI
P0AE34
artQ
b0862 JW0846
Arginine ABC transporter permease protein ArtQ
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted)
 
SRP
YidC
 
 
yes
yes
ARGO_ECOLI
P11667
argO

yggA

b2923 JW2890
Arginine exporter protein ArgO
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein(experimental)
IM (predicted)
 
SRP
SEC
 
 
yes
yes
ASTA_ECOLI
P0AE37
astA

ydjV

b1747 JW1736
Arginine N-succinyltransferase (AST) (EC 2.3.1.109) (AOST)
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ARGR_ECOLI
P0A6D0
argR

xerA

b3237 JW3206
Arginine repressor
Nucleoid
N
Cytoplasm.
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ARTP_ECOLI
P0AAF6
artP
b0864 JW0848
Arginine transport ATP-binding protein ArtP (EC 3.6.3.-)
Peripheral inner membrane protein facing the cytoplasm
F1
Cell inner membrane | Peripheral membrane protein
Cytoplasmic (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
ADIC_ECOLI
P60061
adiC

aniC yjdD yjdE

b4115 JW4076
Arginine/agmatine antiporter
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted)
 
SRP
SEC
 
 
yes
yes
ARLY_ECOLI
P11447
argH
b3960 JW3932
Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
Peripheral inner membrane protein facing the cytoplasm
F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ASSY_ECOLI
P0A6E4
argG
b3172 JW3140
Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase)
Peripheral inner membrane protein facing the cytoplasm
F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
SYR_ECOLI
P11875
argS
b1876 JW1865
Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA ligase) (ArgRS)
Cytoplasmic
A
Cytoplasm
Cytoplasmic
IM (predicted)
 
 
 
 
 
yes
yes
AROP_ECOLI
P15993
aroP
b0112 JW0108
Aromatic amino acid transport protein AroP (General aromatic amino acid permease)
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted)
 
SRP
YidC
 
 
yes
yes
TYRB_ECOLI
P04693
tyrB
b4054 JW4014
Aromatic-amino-acid aminotransferase (ARAT) (AROAT) (EC 2.6.1.57)
Cytoplasmic
A
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ARSC_ECOLI
P0AB96
arsC

arsG

b3503 JW3470
Arsenate reductase (EC 1.20.4.1) (Arsenical pump modifier)
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ARSB_ECOLI
P0AB93
arsB

arsF

b3502 JW3469
Arsenical pump membrane protein (Arsenic efflux pump protein)
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
IM (predicted)
 
SRP
SEC
 
 
no
yes
ARSR_ECOLI
P37309
arsR

arsE

b3501 JW3468
Arsenical resistance operon repressor
Nucleoid
N
Cytoplasm.
Cytoplasmic
N/A
 
 
 
 
 
no
no
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