STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
RL33_ECOLI
P0A7N9
rpmG
b3636 JW3611
ribosomal protein, 50S L33 RpmG
Cytoplasmic, Ribosomal
A, r
 
Cytoplasmic
N/A
ribosome
 
 
 
 
no
yes
RL34_ECOLI
P0A7P5
rpmH

rimA ssaF

b3703 JW3680
ribosomal protein, 50S L34 RpmH
Cytoplasmic, Ribosomal
A, r
 
Cytoplasmic
N/A
ribosome
 
 
 
 
no
yes
RL35_ECOLI
P0A7Q1
rpmI
b1717 JW1707
ribosomal protein, 50S L35 RpmI
Cytoplasmic, Ribosomal
A, r
 
Cytoplasmic
N/A
ribosome
 
 
 
 
no
yes
RL362_ECOLI
Q2EEQ2
ykgO

rpmJ2

b4506 JW5034
ribosomal protein, 50S L36 2 YkgO
Cytoplasmic, Ribosomal
A, r
 
-
N/A
ribosome
 
 
 
 
no
yes
RL36_ECOLI
P0A7Q6
rpmJ
b3299 JW3261
ribosomal protein, 50S L36 RpmJ
Cytoplasmic, Ribosomal
A, r
 
Cytoplasmic
N/A
ribosome
 
 
 
 
no
yes
RL4_ECOLI
P60723
rplD

eryA

b3319 JW3281
ribosomal protein, 50S L4 RplD
Cytoplasmic, Ribosomal
A, r
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
ribosome
 
 
 
 
yes
yes
RL5_ECOLI
P62399
rplE
b3308 JW3270
ribosomal protein, 50S L5 RplE
Cytoplasmic, Ribosomal
A, r
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
ribosome
 
 
 
 
yes
yes
RL6_ECOLI
P0AG55
rplF
b3305 JW3267
ribosomal protein, 50S L6 RplF
Cytoplasmic, Ribosomal
A, r
 
Cytoplasmic
N/A
ribosome
 
 
 
 
yes
yes
RL7_ECOLI
P0A7K2
rplL
b3986 JW3949
ribosomal protein, 50S L7/L12 RplL
Cytoplasmic, Ribosomal
A, r
 
Cytoplasmic
N/A
ribosome
 
 
 
 
no
yes
RL9_ECOLI
P0A7R1
rplI
b4203 JW4161
ribosomal protein, 50S L9 RplI
Cytoplasmic, Ribosomal
A, r
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
ribosome
 
 
 
 
yes
yes
RF2_ECOLI
P07012
prfB

supK

b2891 JW5847
ribosomal protein, Peptide chain release factor RF2 PrfB
Cytoplasmic, Ribosomal
A, r
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
no
yes
ARFB_ECOLI
P40711
arfB

yaeJ

b0191 JW0187
ribosomal protein, Peptidyl-tRNA hydrolase ArfB
Cytoplasmic, Ribosomal
A, r
Cytoplasm
Cytoplasmic
N/A
ribosome
 
 
 
 
yes
yes
YCIH_ECOLI
P08245
yciH
b1282 JW1274
ribosomal protein, YciH
Cytoplasmic, Ribosomal
A, r
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
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