STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
HCAB_ECOLI
P0CI31
hcaB

phdD yfhX

b2541 JW2525
3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase (EC 1.3.1.n1) (2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase) (CI-dihydrodiol dehydrogenase) (Cis-3-(2-carboxyethenyl)-3,5-cyclohexadiene-1,2-diol dehydrogenase) (Cis-3-(2-ca
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
HCAC_ECOLI
P0ABW0
hcaC

hcaA3 phdB yfhW

b2540 JW2524
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit (Digoxigenin ferredoxin subunit)
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
HCAD_ECOLI
P77650
hcaD

hcaA4 phdA yfhY

b2542 JW2526
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component (EC 1.18.1.3) (Digoxigenin system ferredoxin--NAD(+) reductase component)
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
HCAE_ECOLI
P0ABR5
hcaE

digA hcaA hcaA1 phdC1 yfhU

b2538 JW2522
3-phenylpropionate/cinnamic acid dioxygenase subunit alpha (EC 1.14.12.19) (Digoxigenin subunit alpha)
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
HCAF_ECOLI
Q47140
hcaF

digB hcaA2 hcaB phdC2 yfhV

b2539 JW2523
3-phenylpropionate/cinnamic acid dioxygenase subunit beta (EC 1.14.12.19) (Digoxigenin subunit beta)
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
AROA_ECOLI
P0A6D3
aroA
b0908 JW0891
3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
Cytoplasmic
A
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
RS1_ECOLI
P0AG67
rpsA

ssyF

b0911 JW0894
30S ribosomal protein S1
Ribosomal
r
 
Cytoplasmic (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
RS10_ECOLI
P0A7R5
rpsJ

nusE

b3321 JW3283
30S ribosomal protein S10
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
RS11_ECOLI
P0A7R9
rpsK
b3297 JW3259
30S ribosomal protein S11
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
RS12_ECOLI
P0A7S3
rpsL

strA

b3342 JW3304
30S ribosomal protein S12
Ribosomal
r
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
no
yes
RS13_ECOLI
P0A7S9
rpsM
b3298 JW3260
30S ribosomal protein S13
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
RS14_ECOLI
P0AG59
rpsN
b3307 JW3269
30S ribosomal protein S14
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
RS15_ECOLI
P0ADZ4
rpsO

secC

b3165 JW3134
30S ribosomal protein S15
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
RS16_ECOLI
P0A7T3
rpsP
b2609 JW2590
30S ribosomal protein S16
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
RS17_ECOLI
P0AG63
rpsQ

neaA

b3311 JW3273
30S ribosomal protein S17
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
RS18_ECOLI
P0A7T7
rpsR
b4202 JW4160
30S ribosomal protein S18
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
RS19_ECOLI
P0A7U3
rpsS
b3316 JW3278
30S ribosomal protein S19
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
RS2_ECOLI
P0A7V0
rpsB
b0169 JW0164
30S ribosomal protein S2
Ribosomal
r
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
RS20_ECOLI
P0A7U7
rpsT
b0023 JW0022
30S ribosomal protein S20
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
RS21_ECOLI
P68679
rpsU
b3065 JW3037
30S ribosomal protein S21
Ribosomal
r
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
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