STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
TORD_ECOLI
P36662
torD
b0998 JW0983
Chaperone protein torD
Cytoplasmic
A
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
TATD_ECOLI
P27859
tatD

mttC yigW yigX

b4483 JW5931
Deoxyribonuclease tatD (DNase tatD) (EC 3.1.21.-)
Cytoplasmic
A
Cytoplasm
Cytoplasmic (Experimental)
N/A
 
 
 
 
 
no
yes
TATA_ECOLI
P69428
tatA

mttA1 yigT

b3836 JW3813
Sec-independent protein translocase protein tatA
Integral Inner Membrane
B
Cell inner membrane | Single-pass membrane protein | Cytoplasmic side
Membrane anchored (Experimental)
IM (predicted), Detected in IM Fraction
 
SRP
SEC
 
 
yes
yes
TATB_ECOLI
P69425
tatB

mttA2 ysgB

b3838 JW5580
Sec-independent protein translocase protein tatB
Integral Inner Membrane
B
Cell inner membrane | Single-pass membrane protein
Membrane anchored (Experimental)
IM (predicted), Detected in IM Fraction
 
SRP
SEC
 
 
yes
yes
TATC_ECOLI
P69423
tatC

mttB yigU yigV

b3839 JW3815
Sec-independent protein translocase protein tatC
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted), Detected in IM Fraction
 
SRP
SEC
 
 
yes
yes
LEP_ECOLI
P00803
lepB
b2568 JW2552
Signal peptidase I (SPase I) (EC 3.4.21.89) (Leader peptidase I)
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted)
 
 
YidC
 
 
yes
yes
DMSD_ECOLI
P69853
dmsD

ynfI

b1591 JW5262
Twin-arginine leader-binding protein dmsD
Peripheral inner membrane protein facing the cytoplasm
F1
Cell inner membrane | Peripheral membrane proteinCytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
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