STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
DMSD_ECOLI
P69853
dmsD

ynfI

b1591 JW5262
cytoplasmic peripheral IM protein, Tat proofreading chaperone DmsD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
TATD_ECOLI
P27859
tatD

mttC yigW yigX

b4483 JW5931
cytoplasmic protein, 3'-5' ssDNA/RNA exonuclease TatD
Cytoplasmic
A
Cytoplasm
Cytoplasmic (Experimental)
N/A
 
 
 
 
 
no
yes
TORD_ECOLI
P36662
torD
b0998 JW0983
cytoplasmic protein, Chaperone TorD
Cytoplasmic
A
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
TATA_ECOLI
P69428
tatA

mttA1 yigT

b3836 JW3813
integral IM protein (SEC in IM), Sec-independent translocase TatA
Integral Inner Membrane
B
Cell inner membrane
Membrane anchored (Experimental)
IM (predicted), Detected in IM Fraction
 
SRP
SEC
 
 
yes
yes
TATB_ECOLI
P69425
tatB

mttA2 ysgB

b3838 JW5580
integral IM protein (SEC in IM), Sec-independent translocase TatB
Integral Inner Membrane
B
Cell inner membrane
Membrane anchored (Experimental)
IM (predicted), Detected in IM Fraction
 
SRP
SEC
 
 
yes
yes
TATC_ECOLI
P69423
tatC

mttB yigU yigV

b3839 JW3815
integral IM protein (SEC-YidC in IM), Sec-independent translocase TatC
Integral Inner Membrane
B
Cell inner membrane
Integral Membrane Protein
IM (predicted), Detected in IM Fraction
 
SRP
SEC-YidC
 
 
yes
yes
LEP_ECOLI
P00803
lepB
b2568 JW2552
integral IM protein (SEC-YidC in IM), Signal peptidase I LepB
Integral Inner Membrane
B
Cell inner membrane
Integral Membrane Protein
IM (predicted)
 
 
SEC-YidC
 
 
yes
yes
Records 1 to 7 of 7     
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 ©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: February 2019.