STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
LOLD_ECOLI
P75957
lolD

ycfV

b1117 JW5162
cytoplasmic peripheral IM protein, -releasing system ATP-binding LolD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane; Peripheral membrane protein
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
LOLC_ECOLI
P0ADC3
lolC

ycfU

b1116 JW5161
integral IM protein (SEC in IM), Lipoprotein-releasing system TM protein LolC
Integral Inner Membrane
B
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein (Experimental)
IM (predicted), Detected in IM Fraction
 
SRP
SEC
 
 
no
yes
LOLE_ECOLI
P75958
lolE

ycfW

b1118 JW1104
integral IM protein (SEC in IM), Lipoprotein-releasing system TM protein LolE
Integral Inner Membrane
B
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein (Experimental)
IM (predicted), Detected in IM Fraction
 
SRP
SEC
 
 
no
yes
LOLB_ECOLI
P61320
lolB

hemM ychC

b1209 JW1200
OM lipoprotein (SEC through IM), inserted in OM by LOL), Outer-LolB
Outer Membrane Lipoprotein
I
Cell outer membrane; Lipid-anchor
Outer membrane Lipoprotein (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
 
SEC
 
LOL: Localization Of Lipoproteins
yes
yes
LOLA_ECOLI
P61316
lolA

lplA yzzV

b0891 JW0874
periplasmic protein (SEC through IM), Outer-carrier LolA
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
 
 
SEC
 
 
yes
yes
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