STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
DEF_ECOLI
P0A6K3
def

fms

b3287 JW3248
cytoplasmic peripheral IM protein, Peptide deformylase Def
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
PDEF_ECOLI
P77172
pdeF

yfgF

b2503 JW2488
integral IM protein (SEC in IM), Cyclic di-GMP phosphodiesterase PdeF
Integral Inner Membrane
B
Cell inner membrane
Integral Membrane Protein
IM (predicted)
 
SRP
SEC
 
 
no
yes
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