STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
HINT_ECOLI
P0ACE7
hinT

ycfF

b1103 JW1089
HIT-like protein hinT
Peripheral inner membrane protein facing the cytoplasm
F1
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ZINT_ECOLI
P76344
zinT

yodA

b1973 JW1956
Metal-binding protein yodA (Cadmium-induced protein yodA)
Periplasmic
G
 
Periplasmic (Experimental)
N/A
 
 
SEC
 
 
yes
yes
INTA_ECOLI
P32053
intA

intX slpA

b2622 JW2602
Prophage CP4-57 integrase
Cytoplasmic
A
Cell membrane | Lipid-anchor
Cytoplasmic
IM (predicted)
 
 
SEC
 
 
no
no
INTD_ECOLI
P24218
intD

int

b0537 JW0525
Prophage DLP12 integrase (Prophage QSR' integrase)
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
no
no
INTE_ECOLI
P75969
intE

ycfI

b1140 JW1126
Prophage lambda integrase (Int(Lambda)) (Prophage e14 integrase)
Cytoplasmic
A
Cell membrane | Multi-pass membrane protein
Cytoplasmic
N/A
 
 
 
 
 
no
no
INTG_ECOLI
P76323
intG
b1936
Putative lambdoid prophage defective integrase
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
no
no
INTQ_ECOLI
P76168
intQ
b1579 JW1571
Putative lambdoid prophage Qin defective integrase (Fragment)
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
no
no
INTR_ECOLI
P76056
intR

ydaP

b1345 JW1339
Putative lambdoid prophage Rac integrase
Cytoplasmic
A
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
no
no
INTF_ECOLI
P71298
intF

yagO

b0281 JW0275
Putative prophage CP4-6 integrase
Cytoplasmic
A
 
Cytoplasmic
N/A
 
TF
 
 
 
no
no
INTS_ECOLI
P37326
intS

intC yfdB

b2349 JW2345
Putative prophage CPS-53 integrase
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
no
no
INTZ_ECOLI
P76542
intZ
b2442
Putative prophage CPZ-55 integrase
Cytoplasmic
A
 
Cytoplasmic
N/A
 
 
 
 
 
no
no
INTB_ECOLI
P39347
intB
b4271 JW4227
Putative prophage P4 integrase (Int(P4))
Cytoplasmic
A
 
Cytoplasmic
IM (predicted)
 
 
 
 
 
no
no
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