STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
YFAL_ECOLI
P45508
yfaL

yfaF yfaJ yfaK

b2233 JW2227
OM b-barrel protein (SEC through IM), T5S secreted through OM), Probable autotransporter YfaL
Outer Membrane b-barrel protein
H
Probable autotransporter YfaL: Periplasm; Probable secreted autotransporter protein YfaL: Secreted Cell surface; Probable autotransporter YfaL translocator: Cell outer membrane
Periplasmic
N/A
 
 
SEC
 
T5S: Type V Secretion System
yes
yes
YDBA_ECOLI
P33666
ydbA
b4492 JW5802/JW1402 b1401/b1405
OM b-barrel protein (SEC through IM), T5S secreted through OM), Putative exported YdbA
Outer Membrane b-barrel protein
H
Secreted
Cytoplasmic
IM (predicted)
 
 
SEC
 
T5S: Type V Secretion System
no
yes
YAIT_ECOLI
P77199
yaiT
b4580 JW0362/JW5051 b0371 b0374
OM b-barrel protein (SEC through IM), T5S secreted through OM), Putative YaiT
Outer Membrane b-barrel protein
H
 
Periplasmic
N/A
 
SRP
SEC
 
T5S: Type V Secretion System
no
no
YCGI_ECOLI
P76000
ycgI

ymgH

b4521 JW1162/JW5179 b1173
OM b-barrel protein (SEC through IM), T5S secreted through OM), Putative YcgI
Outer Membrane b-barrel protein
H
 
Cytoplasmic
N/A
 
 
SEC
 
T5S: Type V Secretion System
no
no
YEJO_ECOLI
P33924
yejO
b2190 JW5839
OM b-barrel protein (SEC through IM), T5S secreted through OM), Putative YejO
Outer Membrane b-barrel protein
H
Cell outer membrane
cytoplasmic
N/A
 
 
SEC
 
T5S: Type V Secretion System
no
no
YCGV_ECOLI
P76017
ycgV
b1202 JW1193
OM b-barrel protein (SEC through IM, T5S secreted through OM), YcgV
Outer Membrane b-barrel protein
H
 
Cytoplasmic
IM (predicted)
 
SRP
SEC
 
T5S: Type V Secretion System
no
yes
YDEU_ECOLI
P77286
ydeU
b1509 JW1502
OM b-barrel protein (SEC through IM, T5S secreted through OM), YdeU
Outer Membrane b-barrel protein
H
 
Cytoplasmic
N/A
 
 
SEC
 
T5S: Type V Secretion System
no
yes
YHJY_ECOLI
P37663
yhjY
b3548 JW5659
OM b-barrel protein (SEC through IM, T5S secreted through OM), YhjY
Outer Membrane b-barrel protein
H
 
Periplasmic
N/A
 
 
SEC
 
T5S: Type V Secretion System
no
yes
YPJA_ECOLI
P52143
ypjA
b2647 JW5422
OM b-barrel protein (SEC through IM, T5S secreted through OM), YpjA
Outer Membrane b-barrel protein
H
Cell outer membrane
Outer Membrane ??-barrel protein
N/A
 
SRP
SEC
 
T5S: Type V Secretion System
no
yes
Records 1 to 9 of 9     
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