STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

 Search
    

E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
ARCA_ECOLI
P0A9Q1
arcA

cpxC dye fexA msp seg sfrA

b4401 JW4364
cytoplasmic nucleoid peripheral IM protein, Aerobic respiration control ArcA
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
SYA_ECOLI
P00957
alaS

lovB

b2697 JW2667
cytoplasmic nucleoid peripheral IM protein, Alanine--tRNA ligase AlaS
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cytoplasm
Cytoplasmic
N/A
 
TF
 
 
 
no
yes
RHLB_ECOLI
P0A8J8
rhlB

mmrA

b3780 JW3753
cytoplasmic nucleoid peripheral IM protein, ATP-dependent RNA helicase RhlB
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
PUTA_ECOLI
P09546
putA

poaA

b1014 JW0999
cytoplasmic nucleoid peripheral IM protein, Bifunctional PutA
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
CRP_ECOLI
P0ACJ8
crp

cap csm

b3357 JW5702
cytoplasmic nucleoid peripheral IM protein, cAMP-activated global transcriptional regulator Crp
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
 
Cytoplasmic
N/A
 
TF
 
 
 
yes
yes
DNAA_ECOLI
P03004
dnaA
b3702 JW3679
cytoplasmic nucleoid peripheral IM protein, Chromosomal replication initiator DnaA
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
no
yes
MUKB_ECOLI
P22523
mukB
b0924 JW0907
cytoplasmic nucleoid peripheral IM protein, Chromosome partition MukB
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cytoplasm; nucleoid
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
MUKE_ECOLI
P22524
mukE

kicA ycbA

b0923 JW0906
cytoplasmic nucleoid peripheral IM protein, Chromosome partition MukE
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cytoplasm; nucleoid
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
MUKF_ECOLI
P60293
mukF

kicB

b0922 JW0905
cytoplasmic nucleoid peripheral IM protein, Chromosome partition MukF
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cytoplasm; nucleoid
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
CSGD_ECOLI
P52106
csgD
b1040 JW1023
cytoplasmic nucleoid peripheral IM protein, CsgBAC operon transcriptional regulatory protein CsgD
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cell inner membrane
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
GYRA_ECOLI
P0AES4
gyrA

hisW nalA parD

b2231 JW2225
cytoplasmic nucleoid peripheral IM protein, DNA gyrase subunit A GyrA
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cytoplasm
Cytoplasmic
N/A
 
TF
 
 
 
yes
yes
GYRB_ECOLI
P0AES6
gyrB

acrB cou himB hisU nalC parA pcbA

b3699 JW5625
cytoplasmic nucleoid peripheral IM protein, DNA gyrase subunit B GyrB
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cytoplasm
Cytoplasmic
N/A
 
TF
 
 
 
yes
yes
DPO1_ECOLI
P00582
polA

resA

b3863 JW3835
cytoplasmic nucleoid peripheral IM protein, DNA polymerase I PolA
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
DPS_ECOLI
P0ABT2
dps

pexB vtm

b0812 JW0797
cytoplasmic nucleoid peripheral IM protein, DNA protection during starvation Dps
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cytoplasm; nucleoid
Cytoplasmic (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
RADA_ECOLI
P24554
radA

sms

b4389 JW4352
cytoplasmic nucleoid peripheral IM protein, DNA repair RadA
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
RECF_ECOLI
P0A7H0
recF

uvrF

b3700 JW3677
cytoplasmic nucleoid peripheral IM protein, DNA replication and repair RecF
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cytoplasm
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
PARC_ECOLI
P0AFI2
parC
b3019 JW2987
cytoplasmic nucleoid peripheral IM protein, DNA topoisomerase 4 subunit A ParC
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cell membrane; Peripheral membrane protein
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
FIS_ECOLI
P0A6R3
fis
b3261 JW3229
cytoplasmic nucleoid peripheral IM protein, DNA-binding Fis
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cytoplasm; nucleoid
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
HNS_ECOLI
P0ACF8
hns

bglY cur drdX hnsA msyA osmZ pilG topS

b1237 JW1225
cytoplasmic nucleoid peripheral IM protein, DNA-binding H-NS
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cytoplasm; nucleoid
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
DBHA_ECOLI
P0ACF0
hupA
b4000 JW3964
cytoplasmic nucleoid peripheral IM protein, DNA-binding HU-alpha HupA
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Cytoplasm; nucleoid
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
1  2  3  4  5  6  7  8  9  10  11-20  Next  Last       Records 1 to 20 of 559     
Page Size 

 

 ©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: February 2019.