STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
CSGE_ECOLI
P0AE95
csgE
b1039 JW1022
Curli related periplasmic protein (SEC through IM), Curli production assembly/transport component CsgE
Periplasmic
G
 
Periplasmic (Experimental)
N/A
Curli
 
SEC
SurA
 
yes
yes
SECM_ECOLI
P62395
secM

srrA yacA

b0097 JW5007
cytoplasmic & periplasmic protein (SEC through IM), Secretion monitor SecM
Cytoplasmic, Periplasmic
A, G
Cytoplasm; cytosol
Periplasmic (Experimental)
N/A
 
 
SEC
SurA
 
yes
yes
YGFZ_ECOLI
P0ADE8
ygfZ

yzzW

b2898 JW2866
cytoplasmic & periplasmic protein (SEC through IM), tRNA-modifying YgfZ
Cytoplasmic, Periplasmic
A, G
Cytoplasm
Cytoplasmic (Experimental)
N/A
 
 
SEC
 
 
yes
yes
FIMC_ECOLI
P31697
fimC
b4316 JW4279
Fimbrial periplasmic protein (SEC through IM), Chaperone FimC
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
fimbriae
 
SEC
SurA
 
yes
yes
YBGP_ECOLI
P75749
ybgP
b0717 JW0707
Fimbrial periplasmic protein (SEC through IM), Chaperone YbgP
Periplasmic
G
Periplasm
Periplasmic
N/A
fimbriae
 
SEC
SurA
 
no
yes
YCBF_ECOLI
P40876
ycbF
b0944 JW5124
Fimbrial periplasmic protein (SEC through IM), Chaperone YcbF
Periplasmic
G
Periplasm
Periplasmic
N/A
fimbriae
 
SEC
SurA
 
no
yes
YHCA_ECOLI
P28722
yhcA
b3215 JW3182
Fimbrial periplasmic protein (SEC through IM), Chaperone YhcA
Periplasmic
G
Periplasm
Periplasmic
N/A
fimbriae
 
SEC
 
 
no
yes
ECPA_ECOLI
P0AAA3
ecpA

matB yagZ

b0293 JW0287
Fimbrial periplasmic protein (SEC through IM), Common pilus major fimbrillin subunit EcpA
Periplasmic
G
Fimbrium
Periplasmic (Experimental)
N/A
fimbriae
 
SEC
 
 
no
yes
ELFG_ECOLI
P75858
elfG

ycbT

b0941 JW0924
Fimbrial periplasmic protein (SEC through IM), ElfG
Periplasmic
G
Fimbrium
Periplasmic
N/A
fimbriae
 
SEC
 
CU: Chaperone Usher export system
no
yes
FIMI_ECOLI
P39264
fimI
b4315 JW5779
Fimbrial periplasmic protein (SEC through IM), Fimbrin-like FimI
Periplasmic
G
Fimbrium
Periplasmic
N/A
fimbriae
 
SEC
 
CU: Chaperone Usher export system
no
yes
GLTF_ECOLI
P28721
gltF
b3214 JW3181
Fimbrial periplasmic protein (SEC through IM), GltF
Periplasmic
G
Cell membrane
Periplasmic (Experimental)
N/A
fimbriae
 
SEC
 
 
no
yes
ECPB_ECOLI
P77188
ecpB

matC yagY

b0292 JW0286
Fimbrial periplasmic protein (SEC through IM), Probable chaperone EcpB
Periplasmic
G
 
Periplasmic
N/A
fimbriae
 
SEC
 
 
no
yes
ECPE_ECOLI
P77263
ecpE

matF yagV

b0289 JW5030
Fimbrial periplasmic protein (SEC through IM), Probable chaperone EcpE
Periplasmic
G
 
Periplasmic
N/A
fimbriae
 
SEC
SurA
 
no
yes
ELFD_ECOLI
P75856
elfD

ycbR

b0939 JW0922
Fimbrial periplasmic protein (SEC through IM), Probable chaperone ElfD
Periplasmic
G
Periplasm
Periplasmic
N/A
fimbriae
 
SEC
SurA
 
yes
yes
SFMC_ECOLI
P77249
sfmC
b0531 JW0520
Fimbrial periplasmic protein (SEC through IM), Probable chaperone SfmC
Periplasmic
G
Periplasm
Periplasmic
N/A
fimbriae
SRP (exp)
SEC
SurA
 
yes
yes
YADV_ECOLI
P33128
yadV

ecpD

b0140 JW0136
Fimbrial periplasmic protein (SEC through IM), Probable chaperone YadV
Periplasmic
G
Periplasm
Periplasmic
N/A
fimbriae
 
SEC
SurA
 
no
yes
YEHC_ECOLI
P33342
yehC
b2110 JW2097
Fimbrial periplasmic protein (SEC through IM), Probable chaperone YehC
Periplasmic
G
Periplasm
Periplasmic
N/A
fimbriae
 
SEC
SurA
 
no
yes
YFCS_ECOLI
P77599
yfcS
b2336 JW2333
Fimbrial periplasmic protein (SEC through IM), Probable chaperone YfcS
Periplasmic
G
Periplasm
Periplasmic
N/A
fimbriae
 
SEC
SurA
 
yes
yes
YRAI_ECOLI
P42914
yraI
b3143 JW3112
Fimbrial periplasmic protein (SEC through IM), Probable chaperone YraI
Periplasmic
G
Periplasm
Periplasmic
N/A
fimbriae
SRP (exp)
SEC
SurA
 
no
yes
ECPC_ECOLI
P77802
ecpC

matD yagX

b0291 JW0285
Fimbrial periplasmic protein (SEC through IM), Probable usher EcpC
Periplasmic
G
 
Periplasmic
N/A
fimbriae
 
SEC
SurA
 
no
yes
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