STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Sequences of Sec exported proteins in E.coli K-12 (MG1655)  Export to Excel  Export to CSV  

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Sequences of Sec exported proteins in E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Full Name
ID
Uniprot
Export System
Prediction
Tool
Prediction
Score
Evidence of Signal Peptide
(Experimental/Predicted)
References
Signal Peptide /
Mature Domain
DACC_ECOLI
P08506
dacC
Peripheral inner membrane protein facing the periplasm
F2
Cell inner membrane | Peripheral membrane protein
SEC
SignalP4.1
00.887
Experimental
MTQYSSLLRG LAAGSAFLFL FAPTAFA

AEQTVEAPSV DARAWILMDY ASGKVLAEGN ADEKLDPASL TKIMTSYVVG QALKADKIKL ... see all
CPXP_ECOLI
P0AE85
cpxP
Peripheral inner membrane protein facing the periplasm
F2
Periplasm
SEC
SignalP4.1
01.000
Predicted
 
MRIVTAAVMA STLAVSSLSH A

AEVGSGDNWH PGEELTQRST QSHMFDGISL TEHQRQQMRD LMQQARHEQP PVNVSELETM ... see all
DACA_ECOLI
P0AEB2
dacA
Peripheral inner membrane protein facing the periplasm
F2
Cell inner membrane | Peripheral membrane protein | Cytoplasmic side
SEC
SignalP4.1
00.737
Experimental
MNTIFSARIM KRLALTTALC TAFISAAHA

DDLNIKTMIP GVPQIDAESY ILIDYNSGKV LAEQNADVRR DPASLTKMMT SYVIGQAMKA ... see all
IAP_ECOLI
P10423
iap
Peripheral inner membrane protein facing the periplasm
F2
 
SEC
SignalP4.1
01.000
Predicted
 
MFSALRHRTA ALALGVCFIL PVHA

SSPKPGDFAN TQARHIATFF PGRMTGTPAE MLSADYIRQQ FQQMGYRSDI RTFNSRYIYT ... see all
PRC_ECOLI
P23865
prc
Peripheral inner membrane protein facing the periplasm
F2
Cell inner membrane | Peripheral membrane protein | Periplasmic side
SEC
SignalP4.1
01.000
Predicted
 
MNMFFRLTAL AGLLAIAGQT FA

VEDITRADQI PVLKEETQHA TVSERVTSRF TRSHYRQFDL DQAFSAKIFD RYLNLLDYSH ... see all
DACB_ECOLI
P24228
dacB
Peripheral inner membrane protein facing the periplasm
F2
Periplasm
SEC
SignalP4.1
00.580
Experimental
MRFSRFIIGL TSCIAFSVQA

ANVDEYITQL PAGANLALMV QKVGASAPAI DYHSQQMALP ASTQKVITAL AALIQLGPDF ... see all
YADE_ECOLI
P31666
yadE
Peripheral inner membrane protein facing the periplasm
F2
 
SEC
SignalP4.1
01.000
Predicted
 
MYKQAVILLL MLFTASVSA

ALPARYMQTI ENAAVWAQIG DKMVTVGNIR AGQIIAVEPT AASYYAFNFG FGKGFIDKGH ... see all
DACD_ECOLI
P33013
dacD
Peripheral inner membrane protein facing the periplasm
F2
Cell inner membrane | Peripheral membrane protein
SEC
SignalP4.1
00.485
Predicted
 
MKRRLIIAAS LFVFNLSSGF A

AENIPFSPQP PEIHAGSWVL MDYTTGQILT AGNEHQQRNP ASLTKLMTGY VVDRAIDSHR ... see all
CUSB_ECOLI
P77239
cusB
Peripheral inner membrane protein facing the periplasm
F2
 
SEC
Phobius/LipoP
00.243
Predicted
 
MKKIALIIGS MIAGGIISAA GFTWVAKA

EPPAEKTSTA ERKILFWYDP MYPNTRFDKP GKSPFMDMDL VPKYADEESS ASGVRIDPTQ ... see all
YDGA_ECOLI
P77804
ydgA
Peripheral inner membrane protein facing the periplasm
F2
Cell inner membrane | Peripheral membrane protein | Periplasmic side
SEC
Phobius
00.174
Predicted
 
MNKSLVAVGV IVALGVVWT

GGAWYTGKKI ETHLEDMVAQ ANAQLKLTAP ESNLEVSYQN YHRGVFSSQL QLLVKPIAGK ... see all
 
 
rzoQ
Inner Membrane Lipoprotein
E
Cell membrane | Lipid-anchor
 
 
 
 
 
 
YFJS_ECOLI
O52982
yfjS
Inner Membrane Lipoprotein
E
Cell membrane | Lipid-anchor
SEC
LipoP
18.723
Predicted
 
MKRKTLPLLA LVATSLFLSA

CDDRSDDLKA ISKFKDLTPP RFSDVVSRQD DVSEEWSQVG FSSGLTLQVL RTRESPDGCE ... see all
NLPA_ECOLI
P04846
nlpA
Inner Membrane Lipoprotein
E
Cell inner membrane | Lipid-anchor
SEC
LipoP
21.798
Experimental
MKLTTHHLRT GAALLLAGIL LAG

CDQSSSDAKH IKVGVINGAE QDVAEVAKKV AKEKYGLDVE LVGFSGSLLP NDATNHGELD ... see all
YMBA_ECOLI
P0AB10
ymbA
Inner Membrane Lipoprotein
E
Cell membrane | Lipid-anchor
SEC
LipoP
00.205
Predicted
 
MKKWLVTIAA LWLAG

CSSGEINKNY YQLPVVQSGT QSTASQGNRL LWVEQVTVPD YLAGNGVVYQ TSDVKYVIAN ... see all
APBE_ECOLI
P0AB85
apbE
Inner Membrane Lipoprotein
E
Cell membrane | Lipid-anchor
SEC
LipoP
12.017
Predicted
 
MEISFTRVAL LAAALFFVG

CDQKPQPAKT HATEVTVLEG KTMGTFWRAS IPGIDAKRSA ELKEKIQTQL DADDQLLSTY ... see all
YIAF_ECOLI
P0ADK0
yiaF
Inner Membrane Lipoprotein
E
 
SEC
LipoP
10.353
Predicted
 
MATGKSCSRW FAPLAALLMV VSLSG

CFDKEGDQRK AFIDFLQNTV MRSGERLPTL TADQKKQFGP FVSDYAILYG YSQQVNQAMD ... see all
YIDQ_ECOLI
P0ADM4
yidQ
Inner Membrane Lipoprotein
E
 
SEC
LipoP
00.185
Predicted
 
MIRNVLLAFM ICSGMTLLGG

CSSVMSHTGG KEGTYPGTRA SATMIGDDET NWGTKSLAIL DMPFTAVMDT LLLPWDVFRK ... see all
ACRA_ECOLI
P0AE06
acrA
Inner Membrane Lipoprotein
E
Cell inner membrane | Lipid-anchor
SEC
LipoP
19.636
Predicted
 
MNKNRGFTPL AVVLMLSGSL ALTG

CDDKQAQQGG QQMPAVGVVT VKTEPLQITT ELPGRTSAYR IAEVRPQVSG IILKRNFKEG ... see all
DCRB_ECOLI
P0AEE1
dcrB
Inner Membrane Lipoprotein
E
Periplasm
SEC
LipoP
00.000
Predicted
 
MRNLVKYVGI GLLVMGLAA

CDDKDTNATA QGSVAESNAT GNPVNLLDGK LSFSLPADMT DQSGKLGTQA NNMHVWSDAT ... see all
ACFD_ECOLI
P0CK95
yghJ
Inner Membrane Lipoprotein
E
Cell membrane | Lipid-anchor
SEC
LipoP
37.591
Predicted
 
MNKKFKYKKS LLAAILSATL LAG

CDGGGSGSSS DTPPVDSGTG SLPEVKPDPT PNPEPTPEPT PDPEPTPEPI PDPEPTPEPE ... see all
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