STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Sequences of Sec exported proteins in E.coli K-12 (MG1655)  Export to Excel  Export to CSV  

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Sequences of Sec exported proteins in E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Full Name
ID
Uniprot
Export System
Prediction
Tool
Prediction
Score
Evidence of Signal Peptide
(Experimental/Predicted)
References
Signal Peptide /
Mature Domain
YEBF_ECOLI
P33219
yebF
Extra-cellular
X
Secreted
SEC
LipoP
00.000
experimental
MKKRGAFLGL LLVSACASVF A

ANNETSKSVT FPKCEDLDAA GIAASVKRDY QQNRVARWAD DQKIVGQADP VAWVSLQDIQ ... see all
SECM_ECOLI
P62395
secM
Cytoplasmic, Periplasmic
A,G
Cytoplasm; cytosol
SEC
SignalP4.1
01.000
Predicted
 
MSGILTRWRQ FGKRYFWPHL LLGMVAASLG LPALSNA

AEPNAPAKAT TRNHEPSAKV NFGQLALLEA NTRRPNSNYS VDYWHQHAIR TVIRHLSFAM ... see all
MALE_ECOLI
P0AEX9
malE
Peripheral inner membrane protein facing the periplasm, periplasmic
F2,G
Periplasm
SEC
SignalP4.1
00.000
Experimental
MKIKTGARIL ALSALTTMMF SASALA

KIEEGKLVIW INGDKGYNGL AEVGKKFEKD TGIKVTVEHP DKLEEKFPQV AATGDGPDII ... see all
FECB_ECOLI
P15028
fecB
Peripheral inner membrane protein facing the periplasm, periplasmic
F2,G
Periplasm
SEC
SignalP4.1
01.000
Predicted
 
MLAFIRFLFA GLLLVISHAF A

ATVQDEHGTF TLEKTPQRIV VLELSFADAL AAVDVIPIGI ADDNDAKRIL PEVRAHLKPW ... see all
YBIS_ECOLI
P0AAX8
ybiS
Peripheral outer membrane protein facing the periplasm
F3
Periplasm
SEC
SignalP4.1
01.000
experimental
MNMKLKTLFA AAFAVVGFCS TASA

VTYPLPTDGS RLVGQNQVIT IPEGNTQPLE YFAAEYQMGL SNMMEANPGV DTFLPKGGTV ... see all
BHSA_ECOLI
P0AB40
bhsA
Peripheral outer membrane protein facing the periplasm
F3
Cell outer membrane
SEC
SignalP4.1
01.000
Predicted
 
MKNVKTLIAA AILSSMSFAS FAA

VEVQSTPEGQ QKVGTISANA GTNLGSLEEQ LAQKADEMGA KSFRITSVTG PNTLHGTAVI ... see all
MLTF_ECOLI
P0AGC5
mltF
Peripheral outer membrane protein facing the periplasm
F3
Cell outer membrane
SEC
SignalP4.1
00.000
By similarity
 
MKKLKINYLF IGILALLLAV A

LWPSIPWFGK ADNRIAAIQA RGELRVSTIH TPLTYNEING KPFGLDYELA KQFADYLGVK ... see all
YCBB_ECOLI
P22525
ycbB
Peripheral outer membrane protein facing the periplasm
F3
Membrane
SEC
SignalP4.1
01.000
Predicted
 
MLLNMMCGRQ LSAISLCLAV TFAPLFNAQA

DEPEVIPGDS PVAVSEQGEA LPQAQATAIM AGIQPLPEGA AEKARTQIES QLPAGYKPVY ... see all
ERFK_ECOLI
P39176
erfK
Peripheral outer membrane protein facing the periplasm
F3
Periplasm
SEC
SignalP4.1
01.000
experimental
MRRVNILCSF ALLFASHTSL A

VTYPLPPEGS RLVGQSFTVT VPDHNTQPLE TFAAQYGQGL SNMLEANPGA DVFLPKSGSQ ... see all
YCFS_ECOLI
P75954
ycfS
Peripheral outer membrane protein facing the periplasm
F3
Periplasm
SEC
SignalP4.1
01.000
Predicted
 
MMIKTRFSRW LTFFTFAAAV ALALPAKA

NTWPLPPAGS RLVGENKFHV VENDGGSLEA IAKKYNVGFL ALLQANPGVD PYVPRAGSVL ... see all
YNFB_ECOLI
P76170
ynfB
Peripheral outer membrane protein facing the periplasm
F3
 
SEC
SignalP4.1
01.000
Predicted
 
MKITLSKRIG LLAILLPCAL ALSTTVHA

ETNKLVIESG DSAQSRQHAA MEKEQWNDTR NLRQKVNKRT EKEWDKADAA FDNRDKCEQS ... see all
YNHG_ECOLI
P76193
ynhG
Peripheral outer membrane protein facing the periplasm
F3
Periplasm
SEC
SignalP4.1
01.000
Predicted
 
MKRASLLTLT LIGAFSAIQA AWA

VDYPLPPTGS RLVGQNQTYT VQEGDKNLQA IARRFDTAAM LILEANNTIA PVPKPGTTIT ... see all
FIMA1_ECOLI
P04128
fimA
Peripheral outer membrane protein facing the extra-cellular space
F4
Fimbrium
SEC
SignalP4.1
00.000
Predicted
 
MKIKTLAIVV LSALSLSSTA ALA

AATTVNGGTV HFKGEVVNAA CAVDAGSVDQ TVQLGQVRTA SLAQEGATSS AVGFNIQLND ... see all
FIMF_ECOLI
P08189
fimF
Peripheral outer membrane protein facing the extra-cellular space
F4
Fimbrium
SEC
SignalP4.1
00.000
Predicted
 
MRNKPFYLLC AFLWLAVSHA LA

ADSTITIRGY VRDNGCSVAA ESTNFTVDLM ENAAKQFNNI GATTPVVPFR ILLSPCGNAV ... see all
FIMG_ECOLI
P08190
fimG
Peripheral outer membrane protein facing the extra-cellular space
F4
Fimbrium
SEC
SignalP4.1
00.000
Predicted
 
MKWCKRGYVL AAILALASAT IQA

ADVTITVNGK VVAKPCTVST TNATVDLGDL YSFSLMSAGA ASAWHDVALE LTNCPVGTSR ... see all
FIMH_ECOLI
P08191
fimH
Peripheral outer membrane protein facing the extra-cellular space
F4
Fimbrium
SEC
SignalP4.1
00.000
Experimental
MKRVITLFAV LLMGWSVNAW S

FACKTANGTA IPIGGGSANV YVNLAPVVNV GQNLVVDLST QIFCHNDYPE TITDYVTLQR ... see all
CSGB_ECOLI
P0ABK7
csgB
Peripheral outer membrane protein facing the extra-cellular space
F4
Fimbrium
SEC
SignalP4.1
00.000
Predicted
 
MKNKLLFMML TILGAPGIAA A

AGYDLANSEY NFAVNELSKS SFNQAAIIGQ AGTNNSAQLR QGGSKLLAVV AQEGSSNRAK ... see all
CSGF_ECOLI
P0AE98
csgF
Peripheral outer membrane protein facing the extra-cellular space
F4
Cell outer membrane
SEC
SignalP4.1
00.000
Predicted
 
MRVKHAVVLL MLISPLSWA

GTMTFQFRNP NFGGNPNNGA FLLNSAQAQN SYKDPSYNDD FGIETPSALD NFTQAIQSQI ... see all
CSGA_ECOLI
P28307
csgA
Peripheral outer membrane protein facing the extra-cellular space
F4
Fimbrium
SEC
SignalP4.1
00.000
Experimental
MKLLKVAAIA AIVFSGSALA

GVVPQYGGGG NHGGGGNNSG PNSELNIYQY GGGNSALALQ TDARNSDLTI TQHGGGNGAD ... see all
YADC_ECOLI
P31058
yadC
Peripheral outer membrane protein facing the extra-cellular space
F4
Fimbrium
SEC
SignalP4.1
00.000
Predicted
 
MKTIFRYILF LALYSCCNTV SA

YTSFIVGNNA GVDNYRGPST AAQMTFNYTS TASNLVFYKP TQLGPTGVKM YWSYLDTGTG ... see all
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