STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Sequences of Sec exported proteins in E.coli K-12 (MG1655)  Export to Excel  Export to CSV  

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Sequences of Sec exported proteins in E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Full Name
ID
Uniprot
Export System
Prediction
Tool
Prediction
Score
Evidence of Signal Peptide
(Experimental/Predicted)
References
Signal Peptide /
Mature Domain
YIDX_ECOLI
P0ADM6
yidX
Outer Membrane Lipoprotein
I
Membrane
SEC
LipoP
20.000
Predicted
 
MKLNFKGFFK AAGLFPLALM LSG

CISYALVSHT AKGSSGKYQS QSDTITGLSQ AKDSNGTKGY VFVGESLDYL ITDGADDIVK ... see all
YIFL_ECOLI
P0ADN6
yifL
Outer Membrane Lipoprotein
I
Cell membrane
SEC
LipoP
00.000
Predicted
 
MKNVFKALTV LLTLFSLTG

CGLKGPLYFP PADKNAPPPT KPVETQTQST VPDKNDRATG DGPSQVNY] ... see all
YGGE_ECOLI
P0ADS6
yggE
Periplasmic
G
 
SEC
SignalP4.1
01.000
Predicted
 
MKFKVIALAA LMGISGMAAQ A

NELPDGPHIV TSGTASVDAV PDIATLAIEV NVAAKDAATA KKQADERVAQ YISFLELNQI ... see all
YGGN_ECOLI
P0ADS9
yggN
Periplasmic
G
 
SEC
SignalP4.1
01.000
Predicted
 
MMRKMLLAAA LSVTAMTAHA

DYQCSVTPRD DVIVSPQTVQ VKGENGNLVI TPDGNVMYNG KQYSLNAAQR EQAKDYQAEL ... see all
YGIW_ECOLI
P0ADU5
ygiW
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKKFAAVIAV MALCSAPVMA

AEQGGFSGPS ATQSQAGGFQ GPNGSVTTVE SAKSLRDDTW VTLRGNIVER ISDDLYVFKD ... see all
LPTA_ECOLI
P0ADV1
lptA
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKFKTNKLSL NLVLASSLLA ASIPAFA

VTGDTDQPIH IESDQQSLDM QGNVVTFTGN VIVTQGTIKI NADKVVVTRP GGEQGKEVID ... see all
MLAC_ECOLI
P0ADV7
mlaC
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
Predicted
 
MFKRLMMVAL LVIAPLSAAT A

ADQTNPYKLM DEAAQKTFDR LKNEQPQIRA NPDYLRTIVD QELLPYVQVK YAGALVLGQY ... see all
YHHA_ECOLI
P0ADX7
yhhA
Periplasmic
G
 
SEC
SignalP4.1
00.000
Predicted
 
MKRLLILTAL LPFVGFA

QPINTLNNPN QPGYQIPSQQ RMQTQMQTQQ IQQKGMLNQQ LKTQTQLQQQ HLENQINNNS ... see all
ACRA_ECOLI
P0AE06
acrA
Inner Membrane Lipoprotein
E
Cell inner membrane
SEC
LipoP
19.000
Predicted
 
MNKNRGFTPL AVVLMLSGSL ALTG

CDDKQAQQGG QQMPAVGVVT VKTEPLQITT ELPGRTSAYR IAEVRPQVSG IILKRNFKEG ... see all
APHA_ECOLI
P0AE22
aphA
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
Experimental
MRKITQAISA VCLLFALNSS AVALA

SSPSPLNPGT NVARLAEQAP IHWVSVAQIE NSLAGRPPMA VGFDIDDTVL FSSPGFWRGK ... see all
CPXP_ECOLI
P0AE85
cpxP
Peripheral inner membrane protein facing the periplasm
F2
Periplasm
SEC
SignalP4.1
01.000
Predicted
 
MRIVTAAVMA STLAVSSLSH A

AEVGSGDNWH PGEELTQRST QSHMFDGISL TEHQRQQMRD LMQQARHEQP PVNVSELETM ... see all
CREA_ECOLI
P0AE91
creA
Periplasmic
G
 
SEC
SignalP4.1
01.000
Predicted
 
MKYKHLILSL SLIMLGPLAH A

EEIGSVDTVF KMIGPDHKIV VEAFDDPDVK NVTCYVSRAK TGGIKGGLGL AEDTSDAAIS ... see all
CSGE_ECOLI
P0AE95
csgE
Periplasmic
G
 
SEC
SignalP4.1
00.000
Predicted
 
MKRYLRWIVA AEFLFAAGNL HA

VEVEVPGLLT DHTVSSIGHD FYRAFSDKWE SDYTGNLTIN ERPSARWGSW ITITVNQDVI ... see all
CSGF_ECOLI
P0AE98
csgF
Peripheral outer membrane protein facing the extra-cellular space
F4
Cell outer membrane
SEC
SignalP4.1
00.000
Predicted
 
MRVKHAVVLL MLISPLSWA

GTMTFQFRNP NFGGNPNNGA FLLNSAQAQN SYKDPSYNDD FGIETPSALD NFTQAIQSQI ... see all
CSGG_ECOLI
P0AEA2
csgG
Outer Membrane Lipoprotein, Peripheral outer membrane protein facing the extra-cellular space
I,F4
Cell membrane
SEC
LipoP
12.000
Predicted
 
MQRLFLLVAV MLLSG

CLTAPPKEAA RPTLMPRAQS YKDLTHLPAP TGKIFVSVYN IQDETGQFKP YPASNFSTAV ... see all
DACA_ECOLI
P0AEB2
dacA
Peripheral inner membrane protein facing the periplasm
F2
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side
SEC
SignalP4.1
00.000
Experimental
MNTIFSARIM KRLALTTALC TAFISAAHA

DDLNIKTMIP GVPQIDAESY ILIDYNSGKV LAEQNADVRR DPASLTKMMT SYVIGQAMKA ... see all
DCRB_ECOLI
P0AEE1
dcrB
Inner Membrane Lipoprotein
E
Periplasm
SEC
LipoP
00.000
Predicted
 
MRNLVKYVGI GLLVMGLAA

CDDKDTNATA QGSVAESNAT GNPVNLLDGK LSFSLPADMT DQSGKLGTQA NNMHVWSDAT ... see all
DEGS_ECOLI
P0AEE3
degS
Periplasmic
G
Cell inner membrane
SEC
Phobius
00.000
Predicted
 
MFVKLLRSVA IGLIVGAILL VAMPSLRS

LNPLSTPQFD STDETPASYN LAVRRAAPAV VNVYNRGLNT NSHNQLEIRT LGSGVIMDQR ... see all
DGAL_ECOLI
P0AEE5
mglB
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.000
Experimental
MNKKVLTLSA VMASMLFGAA AHA

ADTRIGVTIY KYDDNFMSVV RKAIEQDAKA APDVQLLMND SQNDQSKQND QIDVLLAKGV ... see all
DSBA_ECOLI
P0AEG4
dsbA
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKKIWLALAG LVLAFSASA

AQYEDGKQYT TLEKPVAGAP QVLEFFSFFC PHCYQFEEVL HISDNVKKKL PEGVKMTKYH ... see all
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