STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Sequences of Sec exported proteins in E.coli K-12 (MG1655)  Export to Excel  Export to CSV  

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Sequences of Sec exported proteins in E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Full Name
ID
Uniprot
Export System
Prediction
Tool
Prediction
Score
Evidence of Signal Peptide
(Experimental/Predicted)
References
Signal Peptide /
Mature Domain
TREA_ECOLI
P13482
treA
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKSPAPSRPQ KMALIPACIF LCFAALSVQA

EETPVTPQPP DILLGPLFND VQNAKLFPDQ KTFADAVPNS DPLMILADYR MQQNQSGFDL ... see all
CHIA_ECOLI
P13656
chiA
Periplasmic, Extra-cellular
G,X
Periplasm
SEC
SignalP3
01.000
Predicted
 
MKLNIFTKSM IGMGLVCSAL PALA

MEAWNNQQGG NKYQVIFDGK IYENAWWVSS TNCPGKAKAN DATNPWRLKR TATAAEISQF ... see all
FECB_ECOLI
P15028
fecB
Peripheral inner membrane protein facing the periplasm, periplasmic
F2,G
Periplasm
SEC
SignalP4.1
01.000
Predicted
 
MLAFIRFLFA GLLLVISHAF A

ATVQDEHGTF TLEKTPQRIV VLELSFADAL AAVDVIPIGI ADDNDAKRIL PEVRAHLKPW ... see all
PHND_ECOLI
P16682
phnD
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
Predicted
 
MNAKIIASLA FTSMFSLSTL LSPAHA

EEQEKALNFG IISTESQQNL KPQWTPFLQD MEKKLGVKVN AFFAPDYAGI IQGMRFNKVD ... see all
CYSP_ECOLI
P16700
cysP
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MAVNLLKKNS LALVASLLLA GHVQA

TELLNSSYDV SRELFAALNP PFEQQWAKDN GGDKLTIKQS HAGSSKQALA ILQGLKADVV ... see all
FHUE_ECOLI
P16869
fhuE
Outer Membrane b-barrel protein
H
Cell outer membrane
SEC
SignalP3
01.000
experimental
MLSTQFNRDN QYQAITKPSL LAGCIALALL PSAAFA

APATEETVIV EGSATAPDDG ENDYSVTSTS AGTKMQMTQR DIPQSVTIVS QQRMEDQQLQ ... see all
CIRA_ECOLI
P17315
cirA
Outer Membrane b-barrel protein
H
Cell outer membrane
SEC
SignalP3
00.000
experimental
MFRLNPFVRV GLCLSAISCA WPVLA

VDDDGETMVV TASSVEQNLK DAPASISVIT QEDLQRKPVQ NLKDVLKEVP GVQLTNEGDN ... see all
YFAA_ECOLI
P17994
yfaA
Periplasmic
G
 
SEC
SignalP4.1
00.000
Predicted
 
MSGEKKAKGW RFYGLVGFGA IALLSAGVWA

LQYAGSGPEK TLSPLVVHNN LQIDLNEPDL FLDSDSLSQL PKDLLTIPFL HDVLSEDFVF ... see all
YJJA_ECOLI
P18390
yjjA
Periplasmic
G
 
SEC
SignalP4.1
01.000
Predicted
 
MMKTVKHLLC CAIAASALIS TGVHA

ASWKDALSSA ASELGNQNST TQEGGWSLAS LTNLLSSGNQ ALSADNMNNA AGILQYCAKQ ... see all
GGT_ECOLI
P18956
ggt
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MIKPTFLRRV AIAALLSGSC FSAAA

APPAPPVSYG VEEDVFHPVR AKQGMVASVD ATATQVGVDI LKEGGNAVDA AVAVGYALAV ... see all
AGP_ECOLI
P19926
agp
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
Experimental
MNKTLIAAAV AGIVLLASNA QA

QTVPEGYQLQ QVLMMSRHNL RAPLANNGSV LEQSTPNKWP EWDVPGGQLT TKGGVLEVYM ... see all
RNI_ECOLI
P21338
rna
Periplasmic
G
Periplasm Cytoplasm
SEC
SignalP4.1
01.000
experimental
MKAFWRNAAL LAVSLLPFSS ANA

LALQAKQYGD FDRYVLALSW QTGFCQSQHD RNRNERDECR LQTETTNKAD FLTVHGLWPG ... see all
NMPC_ECOLI
P21420
nmpC
Outer Membrane b-barrel protein
H
Cell outer membrane; Multi-pass membrane protein
SEC
SignalP3
01.000
Predicted
 
MKKLTVAISA VAASVLMAMS AQA

AEIYNKDSNK LDLYGKVNAK HYFSSNDADD GDTTYARLGF KGETQINDQL TGFGQWEYEF ... see all
YCBB_ECOLI
P22525
ycbB
Peripheral outer membrane protein facing the periplasm
F3
Membrane
SEC
SignalP4.1
01.000
Predicted
 
MLLNMMCGRQ LSAISLCLAV TFAPLFNAQA

DEPEVIPGDS PVAVSEQGEA LPQAQATAIM AGIQPLPEGA AEKARTQIES QLPAGYKPVY ... see all
ECOT_ECOLI
P23827
eco
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKTILPAVLF AAFATTSAWA

AESVQPLEKI APYPQAEKGM KRQVIQLTPQ EDESTLKVEL LIGQTLEVDC NLHRLGGKLE ... see all
OPPA_ECOLI
P23843
oppA
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MTNITKRSLV AAGVLAALMA GNVALA

ADVPAGVTLA EKQTLVRNNG SEVQSLDPHK IEGVPESNIS RDLFEGLLVS DLDGHPAPGV ... see all
DPPA_ECOLI
P23847
dppA
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MRISLKKSGM LKLGLSLVAM TVAASVQA

KTLVYCSEGS PEGFNPQLFT SGTTYDASSV PLYNRLVEFK IGTTEVIPGL AEKWEVSEDG ... see all
PSPE_ECOLI
P23857
pspE
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MFKKGLLALA LVFSLPVFA

AEHWIDVRVP EQYQQEHVQG AINIPLKEVK ERIATAVPDK NDTVKVYCNA GRQSGQAKEI ... see all
PRC_ECOLI
P23865
prc
Peripheral inner membrane protein facing the periplasm
F2
Cell inner membrane; Peripheral membrane protein; Periplasmic side
SEC
SignalP4.1
01.000
Predicted
 
MNMFFRLTAL AGLLAIAGQT FA

VEDITRADQI PVLKEETQHA TVSERVTSRF TRSHYRQFDL DQAFSAKIFD RYLNLLDYSH ... see all
NLPC_ECOLI
P23898
nlpC
Outer Membrane Lipoprotein
I
Cell membrane
SEC
LipoP
16.000
Predicted
 
MRFCLILITA LLLAG

CSHHKAPPPN ARLSDSITVI AGLNDQLQSW HGTPYRYGGM TRRGVDCSGF VVVTMRDRFD ... see all
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