STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Sequences of Sec exported proteins in E.coli K-12 (MG1655)  Export to Excel  Export to CSV  

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Sequences of Sec exported proteins in E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Full Name
ID
Uniprot
Export System
Prediction
Tool
Prediction
Score
Evidence of Signal Peptide
(Experimental/Predicted)
References
Signal Peptide /
Mature Domain
NANM_ECOLI
P39371
nanM
Periplasmic
G
Periplasm
SEC
SignalP3
01.000
experimental
 
MNKTITALAI MMASFAANA

SVLPETPVPF KSGTGAIDND TVYIGLGSAG TAWYKLDTQA KDKKWTALAA FPGGPRDQAT ... see all
YGIL_ECOLI
P39834
ygiL
Periplasmic
G
Fimbrium
SEC
SignalP3
01.000
Predicted
 
MSAFKKSLLV AGVAMILSNN VFA

DEGHGIVKFK GEVISAPCSI KPGDEDLTVN LGEVADTVLK SDQKSLAEPF TIHLQDCMLS ... see all
YCBF_ECOLI
P40876
ycbF
Periplasmic
G
Periplasm
SEC
SignalP3
01.000
Predicted
 
MTNTWNRLAL LIFAVLSLLV AGELQA

GVVVGGTRFI FPADRESISI LLTNTSQESW LINSKINRPT RWAGGEASTV PAPLLAAPPL ... see all
PAT_ECOLI
P42588
patA
Periplasmic
G
 
SEC
SignalP3
00.995
Predicted
 
MNRLPSSASA LACSAHA

LNLIEKRTLD HEEMKALNRE VIEYFKEHVN PGFLEYRKSV TAGGDYGAVE WQAGSLNTLV ... see all
YGJJ_ECOLI
P42591
ygjJ
Periplasmic
G
 
SEC
SignalP3
00.996
Predicted
 
MKLITAPCRA LLALPFCYAF SAAG

EEARPAEHDD TKTPAITSTS SPSFRFYGEL GVGGYMDLEG ENKHKYSDGT YIEGGLEMKY ... see all
YGJK_ECOLI
P42592
ygjK
Periplasmic
G
 
SEC
SignalP3
01.000
Predicted
 
MKIKTILTPV TCALLISFSA HA

ANADNYKNVI NRTGAPQYMK DYDYDDHQRF NPFFDLGAWH GHLLPDGPNT MGGFPGVALL ... see all
YQJC_ECOLI
P42616
yqjC
Periplasmic
G
 
SEC
SignalP3
01.000
Predicted
 
MKYRIALAVS LFALSAGSYA

TTLCQEKEQN ILKEISYAEK HQNQNRIDGL NKALSEVRAN CSDSQLRADH QKKIAKQKDE ... see all
YRAH_ECOLI
P42913
yraH
Periplasmic
G
Fimbrium
SEC
SignalP3
01.000
Predicted
 
MNKVTKTAIA GLLALFAGNA AA

TDGEIVFDGE ILKSACEIND SDKKIEVALG HYNAEQFRNI GERSPKIPFT IPLVNCPMTG ... see all
YRAI_ECOLI
P42914
yraI
Periplasmic
G
Periplasm
SEC
SignalP3
01.000
Predicted
 
MSKRTFAVIL TLLCSFCIGQ ALA

GGIVLQRTRV IYDASRKEAA LPVANKGAET PYLLQSWVDN IDGKSRAPFI ITPPLFRLEA ... see all
YRAK_ECOLI
P43319
yraK
Periplasmic
G
Fimbrium
SEC
SignalP3
01.000
Predicted
 
MKRAPLITGL LLISTSCAYA

SSGGCGADST SGATNYSSVV DDVTVNQTDN VTGREFTSAT LSSTNWQYAC SCSAGKAVKL ... see all
YHCE_ECOLI
P45421
yhcE
Periplasmic
G
Cell outer membrane | Multi-pass membrane protein
SEC
SignalP3
00.997
Predicted
 
MKRIITGCLL LNFAMAAQA

ECNISSSIQN IDYGKRSAAM RQVDRGKTTQ LADRTITLVM QCDQDAHIRV QLNTANISNN ... see all
YHCF_ECOLI
P45422
yhcF
Periplasmic
G
 
SEC
SignalP3
01.000
Predicted
 
MNNVKLLIAG SAFFAMSAQA

ADRVSIDVKV TLEAAACTPI LSNGGVVNFG SHSVNRLSTQ HYTQIGTRNI NMTITCESAT ... see all
FKBA_ECOLI
P45523
fkpA
Periplasmic
G
Periplasm
SEC
SignalP3
01.000
experimental
MKSLFKVTLL ATTMAVALHA PITFA

AEAAKPATAA DSKAAFKNDD QKSAYALGAS LGRYMENSLK EQEKLGIKLD KDQLIAGVQD ... see all
AIS_ECOLI
P45565
ais
Periplasmic
G
Periplasm
SEC
SignalP3
01.000
Predicted
 
MLAFCRSSLK SKKYIIILLA LAAIAGLGTH A

AWSSNGLPRI DNKTLARLAQ QHPVVVLFRH AERCDRSTNQ CLSDKTGITV KGTQDARELG ... see all
 
 
hofP
Periplasmic
G
 
 
 
 
 
 
 
GSPJ_ECOLI
P45761
gspJ
Periplasmic
G
 
SEC
SignalP3
00.998
Predicted
 
MINRQQGFTL LEVMAALAIF SMLSVLAFMI FSQA

SELHQRSQKE IQQFNQLQRT ITILDNDLLQ LVARRNRSTD KIMVLGEEAI FTTQSRDPLA ... see all
GSPK_ECOLI
P45762
gspK
Periplasmic
G
Cell inner membrane
SEC
SignalP3
01.000
Predicted
 
MNNEQRGVAL LIVLMLLALM AALA

ADMTLSFHSQ LQRTRQVNHH LQRQYDIELA EKLALASLTQ DVKDNDRQTT LQQYWAQPQQ ... see all
YHDW_ECOLI
P45766
yhdW
Periplasmic
G
Cell inner membrane
SEC
LipoP
20.042
Predicted
 
MKKMMIATLA AASVLLAVAN QAXA

GATLDAVQKK GFVQCGISDG LPGFSYADAD GKFSGIDVDI CRGVAAAVFG DDTKVKYTPL ... see all
YBGF_ECOLI
P45955
ybgF
Periplasmic
G
 
SEC
SignalP3
01.000
Predicted
 
MSSNFRHQLL SLSLLVGIAA PWAAFA

QAPISSVGSG SVEDRVTQLE RISNAHSQLL TQLQQQLSDN QSDIDSLRGQ IQENQYQLNQ ... see all
YGGM_ECOLI
P46142
yggM
Periplasmic
G
 
SEC
SignalP3
01.000
Predicted
 
MKKQWIVGTA LLMLMTGNAW A

DGEPPTENIL KDQFKKQYHG ILKLDAITLK NLDAKGNQAT WSAEGDVSSS DDLYTWVGQL ... see all
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