STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Sequences of Sec exported proteins in E.coli K-12 (MG1655)  Export to Excel  Export to CSV  

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Sequences of Sec exported proteins in E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Full Name
ID
Uniprot
Export System
Prediction
Tool
Prediction
Score
Evidence of Signal Peptide
(Experimental/Predicted)
References
Signal Peptide /
Mature Domain
YADC_ECOLI
P31058
yadC
Peripheral outer membrane protein facing the extra-cellular space
F4
Fimbrium
SEC
SignalP4.1
00.000
Predicted
 
MKTIFRYILF LALYSCCNTV SA

YTSFIVGNNA GVDNYRGPST AAQMTFNYTS TASNLVFYKP TQLGPTGVKM YWSYLDTGTG ... see all
YEDD_ECOLI
P31063
yedD
Outer Membrane Lipoprotein
I
Cell membrane
SEC
LipoP
12.000
Predicted
 
MKKLAIAGAL LLLAG

CAEVENYNNV VKTPAPDWLA GYWQTKGPQR ALVSPEAIGS LIVTKEGDTL DCRQWQRVIA ... see all
MARB_ECOLI
P31121
marB
Periplasmic
G
 
SEC
SignalP3
01.000
Predicted
 
MKPLSSAIAA ALILFSAQGV AE

QTTQPVVTSC ANVVVVPPSQ EHPPFDLNHM GTGSDKSDAL GVPYYNQHAM ] ... see all
YDEI_ECOLI
P31130
ydeI
Periplasmic
G
 
SEC
SignalP3
01.000
Predicted
 
MKFQAIVLAS FLVMPYALA

DDQGGLKQDA APPPPHAIED GYRGTDDAKK MTVDFAKTMH DGASVSLRGN LISHKGEDRY ... see all
POTF_ECOLI
P31133
potF
Periplasmic
G
Periplasm
SEC
SignalP3
01.000
experimental
MTALNKKWLS GLVAGALMAV SVGTLA

AEQKTLHIYN WSDYIAPDTV ANFEKETGIK VVYDVFDSNE VLEGKLMAGS TGFDLVVPSA ... see all
YIEL_ECOLI
P31471
yieL
Periplasmic
G
 
SEC
SignalP3
01.000
Predicted
 
MNIKIAALTL AIASGISAQW AIA

ADMPASPAPT IPVKQYVTQV NADNSVTFRY FAPGAKNVSV VVGVPVPDNI HPMTKDEAGV ... see all
THIB_ECOLI
P31550
thiB
Periplasmic
G
Periplasm
SEC
SignalP3
01.000
experimental
 
MLKKCLPLLL LCTAPVFA

KPVLTVYTYD SFAADWGPGP VVKKAFEADC NCELKLVALE DGVSLLNRLR MEGKNSKADV ... see all
LPTD_ECOLI
P31554
lptD
Outer Membrane b-barrel protein
H
Cell outer membrane
SEC
SignalP3
01.000
experimental
MKKRIPTLLA TMIATALYSQ QGLA

ADLASQCMLG VPSYDRPLVQ GDTNDLPVTI NADHAKGDYP DDAVFTGSVD IMQGNSRLQA ... see all
NFRA_ECOLI
P31600
nfrA
Outer Membrane b-barrel protein
H
Cell outer membrane
SEC
SignalP3
01.000
Predicted
 
MKENNLNRVI GWSGLLLTSL LSTSALA

DNIGTSAEEL GLSDYRHFVI YPRLDKALKA QKNNDEATAI REFEYIHQQV PDNIPLTLYL ... see all
YADE_ECOLI
P31666
yadE
Peripheral inner membrane protein facing the periplasm
F2
 
SEC
SignalP4.1
01.000
Predicted
 
MYKQAVILLL MLFTASVSA

ALPARYMQTI ENAAVWAQIG DKMVTVGNIR AGQIIAVEPT AASYYAFNFG FGKGFIDKGH ... see all
FIMC_ECOLI
P31697
fimC
Periplasmic
G
Periplasm
SEC
SignalP3
01.000
experimental
MSNKNVNVRK SQEITFCLLA GILMFMAMMV AGRAEA

GVALGATRVI YPAGQKQEQL AVTNNDENST YLIQSWVENA DGVKDGRFIV TPPLFAMKGK ... see all
YDDB_ECOLI
P31827
yddB
Outer Membrane b-barrel protein
H
 
SEC
SignalP3
00.000
Predicted
 
MKRVLIPGVI LCGADVAQA

VDDKNMYMHF FEEMTVYAPV PVPVNGNTHY TSESIERLPT GNGNISDLLR TNPAVRMDST ... see all
PQQL_ECOLI
P31828
pqqL
Periplasmic
G
 
SEC
SignalP3
00.000
Predicted
 
MEIIMRNLCF LLTLVATLLL PGRLIA

AALPQDEKLI TGQLDNGLRY MIYPHAHPKD QVNLWLQIHT GSLQEEDNEL GVAHFVEHMM ... see all
YDEK_ECOLI
P32051
ydeK
Outer Membrane Lipoprotein
I
Cell membrane
SEC
LipoP
00.000
Predicted
 
MNRIYRVIWN CTLQVFQA

CSELTRRAGK TSTVNLRKSS GLTTKFSRLT LGVLLALSGS ASGASLEVDN DQITNIDTDV ... see all
YIBG_ECOLI
P32106
yibG
Periplasmic
G
 
SEC
SignalP3
00.000
Predicted
 
MKACLLLFFY FSFICQLHG

ADVKIKQNES MMGSTAMTYD LSEEKLMKLK YKSQHGDSEA SFRLYQYYCF TKNNIYKQLR ... see all
YIIG_ECOLI
P32151
yiiG
Inner Membrane Lipoprotein
E
 
SEC
LipoP
26.000
Predicted
 
MKRNLLSSAI IVAIMSLGLT G

CDDKKAETET LPPANSQPAA PAPEAKPTEA PVAKAEAKPE TPAQPVVDEQ AVFDEKMDVY ... see all
YIIQ_ECOLI
P32160
yiiQ
Periplasmic
G
 
SEC
SignalP3
01.000
Predicted
 
MKPGCTLFFL LCSALTVTTE AHA

QTPDTATTAP YLLAGAPTFD LSISQFREDF NSQNPSLPLN EFRAIDSSPD KANLTRAASK ... see all
YIIX_ECOLI
P32167
yiiX
Periplasmic
G
 
SEC
SignalP3
01.000
Predicted
 
MKNRLLILSL LVSVPAFA

WQPQTGDIIF QISRSSQSKA IQLATHTDYS HTGMLVIRNK KPYVFEAVGP VKYTPLKQWI ... see all
YIJF_ECOLI
P32668
yijF
Periplasmic
G
 
SEC
SignalP3
00.000
Predicted
 
MKASLALLSL LTAFTSHSLK

SPAVPPTVVQ IQANTNLAIA DGARQQIGST LFYDPAYVQL TYPGGDVPQE RGVCSDVVIR ... see all
YJAH_ECOLI
P32681
yjaH
Outer Membrane Lipoprotein
I
 
SEC
LipoP
06.000
Predicted
 
MNSFNEGVVS PLLSFWRRSL MLAGALLLTA

CSHNSSLPPF TASGFAEDQG AVRIWRKDSG DNVHLLAVFS PWRSGDTTTR EYRWQGDNLT ... see all
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