STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Sequences of Sec exported proteins in E.coli K-12 (MG1655)  Export to Excel  Export to CSV  

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Sequences of Sec exported proteins in E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Full Name
ID
Uniprot
Export System
Prediction
Tool
Prediction
Score
Evidence of Signal Peptide
(Experimental/Predicted)
References
Signal Peptide /
Mature Domain
YDES_ECOLI
P77789
ydeS
Peripheral outer membrane protein facing the extra-cellular space
F4
Fimbrium
SEC
SignalP4.1
00.000
Predicted
 
MKYNNIIFLG LCLGLTTYSA LS

ADSVIKISGR VLDYGCTVSS DSLNFTVDLQ KNSARQFPTT GSTSPAVPFQ ITLSECSKGT ... see all
YJBT_ECOLI
A5A628
yjbT
Periplasmic
G
 
SEC
Phobius/SignalP4.1
 
Predicted
 
MKRNLIKVVK MKPYFAALML SVSVLPAYA

GPLGTADKAD LPQSNVSSPM MAQSLRQPDL QPISTDRKTE CFRLYTPDRK PGVNCVPDGS ... see all
PPB_ECOLI
P00634
phoA
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.000
Experimental
MKQSTIALAL LPLLFTPVTK A

RTPEMPVLEN RAAQGDITAP GGARRLTGDQ TAALRDSLSD KPAKNIILLI GDGMGDSEIT ... see all
ASPG2_ECOLI
P00805
ansB
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MEFFKKTALA ALVMGFSGAA LA

LPNITILATG GTIAGGGDSA TKSNYTVGKV GVENLVNAVP QLKDIANVKG EQVVNIGSQD ... see all
AMPC_ECOLI
P00811
ampC
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.000
Experimental
MFKTTLCALL ITASCSTFA

APQQINDIVH RTITPLIEQQ KIPGMAVAVI YQGKPYYFTW GYADIAKKQP VTQQTLFELG ... see all
ARAF_ECOLI
P02924
araF
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
Experimental
MHKFTKALAA IGLAAVMSQS AMA

ENLKLGFLVK QPEEPWFQTE WKFADKAGKD LGFEVIKIAV PDGEKTLNAI DSLAASGAKG ... see all
RBSB_ECOLI
P02925
rbsB
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.000
Experimental
MNMKKLATLV SAVALSATVS ANAMA

KDTIALVVST LNNPFFVSLK DGAQKEADKL GYNLVVLDSQ NNPAKELANV QDLTVRGTKI ... see all
MALM_ECOLI
P03841
malM
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.000
Experimental
MKMNKSLIVL CLSAGLLASA PGISLA

DVNYVPQNTS DAPAIPSAAL QQLTWTPVDQ SKTQTTQLAT GGQQLNVPGI SGPVAAYSVP ... see all
LIVK_ECOLI
P04816
livK
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.000
Experimental
MKRNAKTIIA GMIALAISHT AMA

DDIKVAVVGA MSGPIAQWGD MEFNGARQAI KDINAKGGIK GDKLVGVEYD DACDPKQAVA ... see all
PTRA_ECOLI
P05458
ptrA
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
Predicted
 
MPRSTWFKAL LLLVALWAPL SQA

ETGWQPIQET IRKSDKDNRQ YQAIRLDNGM VVLLVSDPQA VKSLSALVVP VGSLEDPEAY ... see all
CDH_ECOLI
P06282
cdh
Periplasmic
G
Cell inner membrane; Single-pass membrane protein
SEC
Phobius
 
Predicted
 
MKKAGLLFLV MIVIAVVAA

GIGYWKLTGE ESDTLRKIVL EECLPNQQQN QNPSPCAEVK PNAGYVVLKD LNGPLQYLLM ... see all
USHA_ECOLI
P07024
ushA
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKLLQRGVAL ALLTTFTLAS ETALA

YEQDKTYKIT VLHTNDHHGH FWRNEYGEYG LAAQKTLVDG IRKEVAAEGG SVLLLSGGDI ... see all
PPA_ECOLI
P07102
appA
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKAILIPFLS LLIPLTPQSA FA

QSEPELKLES VVIVSRHGVR APTKATQLMQ DVTPDAWPTW PVKLGWLTPR GGELIAYLGH ... see all
CPDB_ECOLI
P08331
cpdB
Periplasmic
G
Periplasm
SEC
SignalP4.1
 
Experimental
MIKFSATLLA TLIAASVNA

ATVDLRIMET TDLHSNMMDF DYYKDTATEK FGLVRTASLI NDARNEVKNS VLVDNGDLIQ ... see all
YGDB_ECOLI
P08370
ygdB
Periplasmic
G
 
SEC
LipoP
00.000
Predicted
 
MNREKGVSSL ALVLMLLVLG SLLLQG

MSQQDRSFAS RVSMESQSLR RQAIVQSALA WGKMHCWQTQ PAVQCSQYAE TDAQVCLRLL ... see all
GLPQ_ECOLI
P09394
glpQ
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKLTLKNLSM AIMMSTIVMG SSAMA

ADSNEKIVIA HRGASGYLPE HTLPAKAMAY AQGADYLEQD LVMTKDDNLV VLHDHYLDRV ... see all
ARGT_ECOLI
P09551
argT
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
Experimental
MKKSILALSL LVGLSTAASS YA

ALPETVRIGT DTTYAPFSSK DAKGDFVGFD IDLGNEMCKR MQVKCTWVAS DFDALIPSLK ... see all
FLGI_ECOLI
P0A6S3
flgI
Periplasmic
G
Periplasm Bacterial flagellum basal body
SEC
SignalP4.1
01.000
Predicted
 
MIKFLSALIL LLVTTAAQAE

RIRDLTSVQG VRQNSLIGYG LVVGLDGTGD QTTQTPFTTQ TLNNMLSQLG ITVPTGTNMQ ... see all
YCEI_ECOLI
P0A8X2
yceI
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKKSLLGLTF ASLMFSAGSA VA

ADYKIDKEGQ HAFVNFRIQH LGYSWLYGTF KDFDGTFTFD EKNPAADKVN VTINTTSVDT ... see all
YCCT_ECOLI
P0A8X4
yccT
Periplasmic
G
 
SEC
SignalP4.1
00.000
Predicted
 
MKTGIVTTLI ALCLPVSVFA

TTLRLSTDVD LLVLDGKKVS SSLLRGADSI ELDNGPHQLV FRVEKTIHLS NSEERLYISP ... see all
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