STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Sequences of Sec exported proteins in E.coli K-12 (MG1655)  Export to Excel  Export to CSV  

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Sequences of Sec exported proteins in E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Full Name
ID
Uniprot
Export System
Prediction
Tool
Prediction
Score
Evidence of Signal Peptide
(Experimental/Predicted)
References
Signal Peptide /
Mature Domain
ACRE_ECOLI
P24180
acrE
Inner Membrane Lipoprotein
E
Cell inner membrane | Lipid-anchor
SEC
LipoP
10.903
Predicted
 
MTKHARFFLL PSFILISAAL IAG

CNDKGEEKAH VGEPQVTVHI VKTAPLEVKT ELPGRTNAYR IAEVRPQVSG IVLNRNFTEG ... see all
 
 
visC
Inner Membrane Lipoprotein
E
 
 
 
 
 
 
 
METQ_ECOLI
P28635
metQ
Inner Membrane Lipoprotein
E
Cell membrane | Lipid-anchor
SEC
LipoP
19.672
Predicted
 
MAFKFKTFAA VGALIGSLAL VG

CGQDEKDPNH IKVGVIVGAE QQVAEVAQKV AKDKYGLDVE LVTFNDYVLP NEALSKGDID ... see all
YIIG_ECOLI
P32151
yiiG
Inner Membrane Lipoprotein
E
 
SEC
LipoP
26.248
Predicted
 
MKRNLLSSAI IVAIMSLGLT G

CDDKKAETET LPPANSQPAA PAPEAKPTEA PVAKAEAKPE TPAQPVVDEQ AVFDEKMDVY ... see all
YJBH_ECOLI
P32689
yjbH
Inner Membrane Lipoprotein
E
Cell membrane | Lipid-anchor
SEC
LipoP
12.867
Predicted
 
MKKRHLLSLL ALGISTA

CYGETYPAPI GPSQSDFGGV GLLQTPTARM AREGELSLNY RDNDQYRYYS ASVQLFPWLE ... see all
YHJA_ECOLI
P37197
yhjA
Inner Membrane Lipoprotein
E
 
SEC
LipoP
04.747
Predicted
 
MKMVSRITAI GLAGVAICYL GLSGYVWY

HDNKRSKQAD VQASAVSENN KVLGFLREKG CDYCHTPSAE LPAYYYIPGA KQLMDYDIKL ... see all
 
 
yfiM
Inner Membrane Lipoprotein
E
 
 
 
 
 
 
 
YNFC_ECOLI
P67553
ynfC
Inner Membrane Lipoprotein
E
Cell membrane | Lipid-anchor
SEC
LipoP
14.412
Predicted
 
MKYKLLPCLL AIFLTG

CDRTEVTLSF TPEMASFSNE FDFDPLRGPV KDFTQTLMDE QGEVTKRVSG TLSEEGCFDS ... see all
YDJY_ECOLI
P76220
ydjY
Inner Membrane Lipoprotein
E
 
SEC
LipoP
15.952
Predicted
 
MLQHYSVSWK KGLAALCLLA VAGLSG

CDQQENAAAK VEYDGLSNSQ PLRVDANNHT VTMLVQINGR FLTDDTRHGI VFKDGSNGHK ... see all
YFBK_ECOLI
P76481
yfbK
Inner Membrane Lipoprotein
E
 
SEC
LipoP
27.352
Predicted
 
MRNKNIIMLL MSSLILSG

CGPQPENKES QQQQPSTPTE QQVLAAQQAA IKEAEQSAAA AKALAQQEVQ QYSDKQALQG ... see all
YFHM_ECOLI
P76578
yfhM
Inner Membrane Lipoprotein
E
Cell membrane | Lipid-anchor
SEC
LipoP
28.723
Predicted
 
MKKLRVAACM LMLALAG

CDNNDNAPTA VKKDAPSEVT KAASSENASS AKLSVPERQK LAQQSAGKVL TLLDLSEVQL ... see all
 
 
ymgJ
Periplasmic
G
 
 
 
 
 
 
 
YJBT_ECOLI
A5A628
yjbT
Periplasmic
G
 
SEC
Phobius/SignalP4.1
 
Predicted
 
MKRNLIKVVK MKPYFAALML SVSVLPAYA

GPLGTADKAD LPQSNVSSPM MAQSLRQPDL QPISTDRKTE CFRLYTPDRK PGVNCVPDGS ... see all
PPB_ECOLI
P00634
phoA
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.408
Experimental
MKQSTIALAL LPLLFTPVTK A

RTPEMPVLEN RAAQGDITAP GGARRLTGDQ TAALRDSLSD KPAKNIILLI GDGMGDSEIT ... see all
ASPG2_ECOLI
P00805
ansB
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MEFFKKTALA ALVMGFSGAA LA

LPNITILATG GTIAGGGDSA TKSNYTVGKV GVENLVNAVP QLKDIANVKG EQVVNIGSQD ... see all
AMPC_ECOLI
P00811
ampC
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.854
Experimental
MFKTTLCALL ITASCSTFA

APQQINDIVH RTITPLIEQQ KIPGMAVAVI YQGKPYYFTW GYADIAKKQP VTQQTLFELG ... see all
ARAF_ECOLI
P02924
araF
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
Experimental
MHKFTKALAA IGLAAVMSQS AMA

ENLKLGFLVK QPEEPWFQTE WKFADKAGKD LGFEVIKIAV PDGEKTLNAI DSLAASGAKG ... see all
RBSB_ECOLI
P02925
rbsB
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.839
Experimental
MNMKKLATLV SAVALSATVS ANAMA

KDTIALVVST LNNPFFVSLK DGAQKEADKL GYNLVVLDSQ NNPAKELANV QDLTVRGTKI ... see all
MALM_ECOLI
P03841
malM
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.606
Experimental
MKMNKSLIVL CLSAGLLASA PGISLA

DVNYVPQNTS DAPAIPSAAL QQLTWTPVDQ SKTQTTQLAT GGQQLNVPGI SGPVAAYSVP ... see all
LIVK_ECOLI
P04816
livK
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.817
Experimental
MKRNAKTIIA GMIALAISHT AMA

DDIKVAVVGA MSGPIAQWGD MEFNGARQAI KDINAKGGIK GDKLVGVEYD DACDPKQAVA ... see all
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