STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Sequences of Sec exported proteins in E.coli K-12 (MG1655)  Export to Excel  Export to CSV  

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Sequences of Sec exported proteins in E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Full Name
ID
Uniprot
Export System
Prediction
Tool
Prediction
Score
Evidence of Signal Peptide
(Experimental/Predicted)
References
Signal Peptide /
Mature Domain
CDH_ECOLI
P06282
cdh
Periplasmic
G
Cell inner membrane; Single-pass membrane protein
SEC
Phobius
 
Predicted
 
MKKAGLLFLV MIVIAVVAA

GIGYWKLTGE ESDTLRKIVL EECLPNQQQN QNPSPCAEVK PNAGYVVLKD LNGPLQYLLM ... see all
FHUA_ECOLI
P06971
fhuA
Outer Membrane b-barrel protein
H
Cell outer membrane
SEC
SignalP3
01.000
experimental
MARSKTAQPK HSLRKIAVVV ATAVSGMSVY AQA

AVEPKEDTIT VTAAPAPQES AWGPAATIAA RQSATGTKTD TPIQKVPQSI SVVTAEEMAL ... see all
OMPC_ECOLI
P06996
ompC
Outer Membrane b-barrel protein
H
Cell outer membrane; Multi-pass membrane protein
SEC
SignalP4
00.000
Experimental
MKVKVLSLLV PALLVAGAAN A

AEVYNKDGNK LDLYGKVDGL HYFSDNKDVD GDQTYMRLGF KGETQVTDQL TGYGQWEYQI ... see all
YFIB_ECOLI
P07021
yfiB
Outer Membrane Lipoprotein
I
Cell membrane
SEC
LipoP
18.000
Predicted
 
MIKHLVAPLV FTSLILTG

CQSPQGKFTP EQVAAMQSYG FTESAGDWSL GLSDAILFAK NDYKLLPESQ QQIQTMAAKL ... see all
USHA_ECOLI
P07024
ushA
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKLLQRGVAL ALLTTFTLAS ETALA

YEQDKTYKIT VLHTNDHHGH FWRNEYGEYG LAAQKTLVDG IRKEVAAEGG SVLLLSGGDI ... see all
PPA_ECOLI
P07102
appA
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKAILIPFLS LLIPLTPQSA FA

QSEPELKLES VVIVSRHGVR APTKATQLMQ DVTPDAWPTW PVKLGWLTPR GGELIAYLGH ... see all
FIMF_ECOLI
P08189
fimF
Peripheral outer membrane protein facing the extra-cellular space
F4
Fimbrium
SEC
SignalP4.1
00.000
Predicted
 
MRNKPFYLLC AFLWLAVSHA LA

ADSTITIRGY VRDNGCSVAA ESTNFTVDLM ENAAKQFNNI GATTPVVPFR ILLSPCGNAV ... see all
FIMG_ECOLI
P08190
fimG
Peripheral outer membrane protein facing the extra-cellular space
F4
Fimbrium
SEC
SignalP4.1
00.000
Predicted
 
MKWCKRGYVL AAILALASAT IQA

ADVTITVNGK VVAKPCTVST TNATVDLGDL YSFSLMSAGA ASAWHDVALE LTNCPVGTSR ... see all
FIMH_ECOLI
P08191
fimH
Peripheral outer membrane protein facing the extra-cellular space
F4
Fimbrium
SEC
SignalP4.1
00.000
Experimental
MKRVITLFAV LLMGWSVNAW S

FACKTANGTA IPIGGGSANV YVNLAPVVNV GQNLVVDLST QIFCHNDYPE TITDYVTLQR ... see all
CPDB_ECOLI
P08331
cpdB
Periplasmic
G
Periplasm
SEC
SignalP4.1
 
Experimental
MIKFSATLLA TLIAASVNA

ATVDLRIMET TDLHSNMMDF DYYKDTATEK FGLVRTASLI NDARNEVKNS VLVDNGDLIQ ... see all
YGDB_ECOLI
P08370
ygdB
Periplasmic
G
 
SEC
LipoP
00.000
Predicted
 
MNREKGVSSL ALVLMLLVLG SLLLQG

MSQQDRSFAS RVSMESQSLR RQAIVQSALA WGKMHCWQTQ PAVQCSQYAE TDAQVCLRLL ... see all
DACC_ECOLI
P08506
dacC
Peripheral inner membrane protein facing the periplasm
F2
Cell inner membrane
SEC
SignalP4.1
00.000
Experimental
MTQYSSLLRG LAAGSAFLFL FAPTAFA

AEQTVEAPSV DARAWILMDY ASGKVLAEGN ADEKLDPASL TKIMTSYVVG QALKADKIKL ... see all
OMPT_ECOLI
P09169
ompT
Outer Membrane b-barrel protein
H
Cell outer membrane; Multi-pass membrane protein
SEC
SignalP3
00.000
experimental
MRAKLLGIVL TTPIAISSFA

STETLSFTPD NINADISLGT LSGKTKERVY LAEEGGRKVS QLDWKFNNAA IIKGAINWDL ... see all
GLPQ_ECOLI
P09394
glpQ
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKLTLKNLSM AIMMSTIVMG SSAMA

ADSNEKIVIA HRGASGYLPE HTLPAKAMAY AQGADYLEQD LVMTKDDNLV VLHDHYLDRV ... see all
ARGT_ECOLI
P09551
argT
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
Experimental
MKKSILALSL LVGLSTAASS YA

ALPETVRIGT DTTYAPFSSK DAKGDFVGFD IDLGNEMCKR MQVKCTWVAS DFDALIPSLK ... see all
FLGH_ECOLI
P0A6S0
flgH
Outer Membrane Lipoprotein
I
Cell outer membrane
SEC
LipoP
17.000
Predicted
 
MQKNAAHTYA ISSLLVLSLT G

CAWIPSTPLV QGATSAQPVP GPTPVANGSI FQSAQPINYG YQPLFEDRRP RNIGDTLTIV ... see all
FLGI_ECOLI
P0A6S3
flgI
Periplasmic
G
Periplasm Bacterial flagellum basal body
SEC
SignalP4.1
01.000
Predicted
 
MIKFLSALIL LLVTTAAQAE

RIRDLTSVQG VRQNSLIGYG LVVGLDGTGD QTTQTPFTTQ TLNNMLSQLG ITVPTGTNMQ ... see all
TOLB_ECOLI
P0A855
tolB
Periplasmic, Peripheral outer membrane protein facing the periplasm
G,F3
Periplasm
SEC
LipoP
00.000
experimental
MKQALRVAFG FLILWASVLH A

EVRIVIDSGV DSGRPIGVVP FQWAGPGAAP EDIGGIVAAD LRNSGKFNPL DRARLPQQPG ... see all
YCEI_ECOLI
P0A8X2
yceI
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKKSLLGLTF ASLMFSAGSA VA

ADYKIDKEGQ HAFVNFRIQH LGYSWLYGTF KDFDGTFTFD EKNPAADKVN VTINTTSVDT ... see all
YCCT_ECOLI
P0A8X4
yccT
Periplasmic
G
 
SEC
SignalP4.1
00.000
Predicted
 
MKTGIVTTLI ALCLPVSVFA

TTLRLSTDVD LLVLDGKKVS SSLLRGADSI ELDNGPHQLV FRVEKTIHLS NSEERLYISP ... see all
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