STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Sequences of Sec exported proteins in E.coli K-12 (MG1655)  Export to Excel  Export to CSV  

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Sequences of Sec exported proteins in E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Full Name
ID
Uniprot
Export System
Prediction
Tool
Prediction
Score
Evidence of Signal Peptide
(Experimental/Predicted)
References
Signal Peptide /
Mature Domain
PTRA_ECOLI
P05458
ptrA
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
Predicted
 
MPRSTWFKAL LLLVALWAPL SQA

ETGWQPIQET IRKSDKDNRQ YQAIRLDNGM VVLLVSDPQA VKSLSALVVP VGSLEDPEAY ... see all
CDH_ECOLI
P06282
cdh
Periplasmic
G
Cell inner membrane | Single-pass membrane protein
SEC
Phobius
 
Predicted
 
MKKAGLLFLV MIVIAVVAA

GIGYWKLTGE ESDTLRKIVL EECLPNQQQN QNPSPCAEVK PNAGYVVLKD LNGPLQYLLM ... see all
USHA_ECOLI
P07024
ushA
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKLLQRGVAL ALLTTFTLAS ETALA

YEQDKTYKIT VLHTNDHHGH FWRNEYGEYG LAAQKTLVDG IRKEVAAEGG SVLLLSGGDI ... see all
PPA_ECOLI
P07102
appA
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKAILIPFLS LLIPLTPQSA FA

QSEPELKLES VVIVSRHGVR APTKATQLMQ DVTPDAWPTW PVKLGWLTPR GGELIAYLGH ... see all
CPDB_ECOLI
P08331
cpdB
Periplasmic
G
Periplasm
SEC
SignalP4.1
 
Experimental
MIKFSATLLA TLIAASVNA

ATVDLRIMET TDLHSNMMDF DYYKDTATEK FGLVRTASLI NDARNEVKNS VLVDNGDLIQ ... see all
YGDB_ECOLI
P08370
ygdB
Periplasmic
G
 
SEC
LipoP
00.998
Predicted
 
MNREKGVSSL ALVLMLLVLG SLLLQG

MSQQDRSFAS RVSMESQSLR RQAIVQSALA WGKMHCWQTQ PAVQCSQYAE TDAQVCLRLL ... see all
GLPQ_ECOLI
P09394
glpQ
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKLTLKNLSM AIMMSTIVMG SSAMA

ADSNEKIVIA HRGASGYLPE HTLPAKAMAY AQGADYLEQD LVMTKDDNLV VLHDHYLDRV ... see all
ARGT_ECOLI
P09551
argT
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
Experimental
MKKSILALSL LVGLSTAASS YA

ALPETVRIGT DTTYAPFSSK DAKGDFVGFD IDLGNEMCKR MQVKCTWVAS DFDALIPSLK ... see all
FLGI_ECOLI
P0A6S3
flgI
Periplasmic
G
PeriplasmBacterial flagellum basal body
 
SignalP4.1
01.000
Predicted
 
MIKFLSALIL LLVTTAAQAE

RIRDLTSVQG VRQNSLIGYG LVVGLDGTGD QTTQTPFTTQ TLNNMLSQLG ITVPTGTNMQ ... see all
TOLB_ECOLI
P0A855
tolB
Periplasmic
G
Periplasm
SEC
LipoP
00.996
experimental
MKQALRVAFG FLILWASVLH A

EVRIVIDSGV DSGRPIGVVP FQWAGPGAAP EDIGGIVAAD LRNSGKFNPL DRARLPQQPG ... see all
YCEI_ECOLI
P0A8X2
yceI
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKKSLLGLTF ASLMFSAGSA VA

ADYKIDKEGQ HAFVNFRIQH LGYSWLYGTF KDFDGTFTFD EKNPAADKVN VTINTTSVDT ... see all
YCCT_ECOLI
P0A8X4
yccT
Periplasmic
G
 
SEC
SignalP4.1
00.999
Predicted
 
MKTGIVTTLI ALCLPVSVFA

TTLRLSTDVD LLVLDGKKVS SSLLRGADSI ELDNGPHQLV FRVEKTIHLS NSEERLYISP ... see all
PTA_ECOLI
P0A9M8
pta
Periplasmic
G
Cytoplasm
SEC
Phobius
 
Predicted
 
MSRIIMLIPT GTSVGLTSVS LG

VIRAMERKGV RLSVFKPIAQ PRTGGDAPDQ TTTIVRANSS TTTAAEPLKM SYVEGLLSSN ... see all
TRXB_ECOLI
P0A9P4
trxB
Periplasmic
G
Cytoplasm
SEC
Phobius/LipoP
00.987
Predicted
 
MGTTKHSKLL ILGSGPAGYT AAVYA

ARANLQPVLI TGMEKGGQLT TTTEVENWPG DPNDLTGPLL MERMHEHATK FETEIIFDHI ... see all
YOBA_ECOLI
P0AA57
yobA
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.997
Predicted
 
MASTARSLRY ALAILTTSLV TPSVWAH

AHLTHQYPAA NAQVTAAPQA ITLNFSEGVE TGFSGAKITG PKNENIKTLP AKRNEQDQKQ ... see all
YACC_ECOLI
P0AA95
yacC
Periplasmic
G
 
SEC
SignalP4.1
01.000
Predicted
 
MKTFFRTVLF GSLMAVCANS YALSE

SEAEDMADLT AVFVFLKNDC GYQNLPNGQI RRALVFFAQQ NQWDLSNYDT FDMKALGEDS ... see all
YAFK_ECOLI
P0AA99
yafK
Periplasmic
G
 
SEC
SignalP4.1
01.000
Predicted
 
MRKIALILAM LLIPCVSFA

GLLGSSSSTT PVSKEYKQQL MGSPVYIQIF KEERTLDLYV KMGEQYQLLD SYKICKYSGG ... see all
MATB_ECOLI
P0AAA3
matB
Periplasmic
G
 
SEC
SignalP4.1
01.000
Predicted
 
MKKKVLAIAL VTVFTGMGVA QA

ADVTAQAVAT WSATAKKDTT SKLVVTPLGS LAFQYAEGIK GFNSQKGLFD VAIEGDSTAT ... see all
ZRAP_ECOLI
P0AAA9
zraP
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKRNTKIALV MMALSAMAMG STSAFA

HGGHGMWQQN AAPLTSEQQT AWQKIHNDFY AQSSALQQQL VTKRYEYNAL LAANPPDSSK ... see all
YKGJ_ECOLI
P0AAL9
ykgJ
Periplasmic
G
 
SEC
LipoP
00.771
Predicted
 
MSNLNPCMTC GACCAFFRVS FYWAE

ADDAGGTIPA RLTEQISPFH RCMSGTNQKN PRCIALAGTP GKNACCTIYK NRSSTCREFA ... see all
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