STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Sequences of Sec exported proteins in E.coli K-12 (MG1655)  Export to Excel  Export to CSV  

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Sequences of Sec exported proteins in E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Full Name
ID
Uniprot
Export System
Prediction
Tool
Prediction
Score
Evidence of Signal Peptide
(Experimental/Predicted)
References
Signal Peptide /
Mature Domain
YCEI_ECOLI
P0A8X2
yceI
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MKKSLLGLTF ASLMFSAGSA VA

ADYKIDKEGQ HAFVNFRIQH LGYSWLYGTF KDFDGTFTFD EKNPAADKVN VTINTTSVDT ... see all
YCCT_ECOLI
P0A8X4
yccT
Periplasmic
G
 
SEC
SignalP4.1
00.999
Predicted
 
MKTGIVTTLI ALCLPVSVFA

TTLRLSTDVD LLVLDGKKVS SSLLRGADSI ELDNGPHQLV FRVEKTIHLS NSEERLYISP ... see all
BLC_ECOLI
P0A901
blc
Outer Membrane Lipoprotein
I
Cell outer membrane | Lipid-anchor
SEC
LipoP
14.624
Predicted
 
MRLLPLVAAA TAAFLVVA

CSSPTPPRGV TVVNNFDAKR YLGTWYEIAR FDHRFERGLE KVTATYSLRD DGGLNVINKG ... see all
BAMC_ECOLI
P0A903
nlpB
Outer Membrane Lipoprotein
I
Cell outer membrane | Lipid-anchor
SEC
LipoP
17.245
Predicted
 
MAYSVQKSRL AKVAGVSLVL LLAA

CSSDSRYKRQ VSGDEAYLEA APLAELHAPA GMILPVTSGD YAIPVTNGSG AVGKALDIRP ... see all
SLYB_ECOLI
P0A905
slyB
Outer Membrane Lipoprotein
I
Cell outer membrane | Lipid-anchor
SEC
LipoP
19.905
Predicted
 
MIKRVLVVSM VGLSLVG

CVNNDTLSGD VYTASEAKQV QNVSYGTIVN VRPVQIQGGD DSNVIGAIGG AVLGGFLGNT ... see all
MIPA_ECOLI
P0A908
mipA
Outer Membrane b-barrel protein
H
Cell outer membrane
SEC
SignalP3
01.000
experimental
MTKLKLLALG VLIATSAGVA HA

EGKFSLGAGV GVVEHPYKDY DTDVYPVPVI NYEGDNFWFR GLGGGYYLWN DATDKLSITA ... see all
OMPA_ECOLI
P0A910
ompA
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
SEC
SignalP4
00.872
Experimental
MKKTAIAIAV ALAGFATVAQ A

APKDNTWYTG AKLGWSQYHD TGFINNNGPT HENQLGAGAF GGYQVNPYVG FEMGYDWLGR ... see all
PAL_ECOLI
P0A912
pal
Outer Membrane Lipoprotein
I
Cell outer membrane | Lipid-anchor
SEC
LipoP
21.666
Predicted
 
MQLNKVLKGL MIALPVMAIA A

CSSNKNASND GSEGMLGAGT GMDANGGNGN MSSEEQARLQ MQQLQQNNIV YFDLDKYDIR ... see all
OMPW_ECOLI
P0A915
ompW
Outer Membrane b-barrel protein
H
Cell outer membrane
SEC
SignalP3
01.000
experimental
MKKLTVAALA VTTLLSGSAF A

HEAGEFFMRA GSATVRPTEG AGGTLGSLGG FSVTNNTQLG LTFTYMATDN IGVELLAATP ... see all
OMPX_ECOLI
P0A917
ompX
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
SEC
SignalP3
01.000
experimental
MKKIACLSAL AAVLAFTAGT SVA

ATSTVTGGYA QSDAQGQMNK MGGFNLKYRY EEDNSPLGVI GSFTYTEKSR TASSGDYNKN ... see all
PA1_ECOLI
P0A921
pldA
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
SEC
SignalP3
00.999
experimental
MRTLQGWLLP VFMLPMAVYA

QEATVKEVHD APAVRGSIIA NMLQEHDNPF TLYPYDTNYL IYTQTSDLNK EAIASYDWAE ... see all
TSX_ECOLI
P0A927
tsx
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
SEC
SignalP3
01.000
Predicted
 
MKKTLLAAGA VLALSSSFTV NA

AENDKPQYLS DWWHQSVNVV GSYHTRFGPQ IRNDTYLEYE AFAKKDWFDF YGYADAPVFF ... see all
WZA_ECOLI
P0A930
wza
Outer Membrane Lipoprotein, Peripheral outer membrane protein facing the extra-cellular space
I, F4
Cell outer membrane | Multi-pass membrane protein
SEC
LipoP
12.393
Predicted
 
MMKSKMKLMP LLVSVTLISG

CTVLPGSNMS TMGKDVIKQQ DADFDLDKMV NVYPLTPRLI DQLRPRPNVA RPNMTLESEI ... see all
GFCE_ECOLI
P0A932
gfcE
Outer Membrane Lipoprotein
I
Cell outer membrane | Multi-pass membrane protein
SEC
LipoP
15.093
Predicted
 
MKKNIFKFSV LTLAVLSLTA

CTLVPGQNLS TSNKDVIELP DNQYDLDKMV NIYPVTPGLI DQLRAKPIMS QANPELEQQI ... see all
MLTA_ECOLI
P0A935
mltA
Outer Membrane Lipoprotein
I
Cell outer membrane | Lipid-anchor
SEC
LipoP
22.736
Predicted
 
MKGRWVKYLL MGTVVAMLAA

CSSKPTDRGQ QYKDGKFTQP FSLVNQPDAV GAPINAGDFA EQINHIRNSS PRLYGNQSNV ... see all
BAME_ECOLI
P0A937
smpA
Outer Membrane Lipoprotein
I
Cell outer membrane | Lipid-anchor
SEC
LipoP
19.000
Predicted
 
MRCKTLTAAA AVLLMLTAG

CSTLERVVYR PDINQGNYLT ANDVSKIRVG MTQQQVAYAL GTPLMSDPFG TNTWFYVFRQ ... see all
BAMA_ECOLI
P0A940
bamA
Outer Membrane b-barrel protein
H
Cell outer membrane
SEC
SignalP3
01.000
experimental
MAMKKLLIAS LLFSSATVYG

AEGFVVKDIH FEGLQRVAVG AALLSMPVRT GDTVNDEDIS NTIRALFATG NFEDVRVLRD ... see all
 
 
panE
Outer Membrane Lipoprotein
I
Cytoplasm
 
 
 
 
 
 
PTA_ECOLI
P0A9M8
pta
Periplasmic
G
Cytoplasm
SEC
Phobius
 
Predicted
 
MSRIIMLIPT GTSVGLTSVS LG

VIRAMERKGV RLSVFKPIAQ PRTGGDAPDQ TTTIVRANSS TTTAAEPLKM SYVEGLLSSN ... see all
TRXB_ECOLI
P0A9P4
trxB
Periplasmic
G
Cytoplasm
SEC
Phobius/LipoP
00.987
Predicted
 
MGTTKHSKLL ILGSGPAGYT AAVYA

ARANLQPVLI TGMEKGGQLT TTTEVENWPG DPNDLTGPLL MERMHEHATK FETEIIFDHI ... see all
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