STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Sequences of Sec exported proteins in E.coli K-12 (MG1655)  Export to Excel  Export to CSV  

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Sequences of Sec exported proteins in E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Full Name
ID
Uniprot
Export System
Prediction
Tool
Prediction
Score
Evidence of Signal Peptide
(Experimental/Predicted)
References
Signal Peptide /
Mature Domain
OSMY_ECOLI
P0AFH8
osmY
Periplasmic, Extra-cellular
G,X
Periplasm
SEC
SignalP3
01.000
experimental
MTMTRLKISK TLLAVMLTSA VATGSAYA

ENNAQTTNES AGQKVDSSMN KVGNFMDDSA ITAKVKAALV DHDNIKSTDI SVKTDQKVVT ... see all
CHIA_ECOLI
P13656
chiA
Periplasmic, Extra-cellular
G,X
Periplasm
 
SignalP3
01.000
Predicted
 
MKLNIFTKSM IGMGLVCSAL PALA

MEAWNNQQGG NKYQVIFDGK IYENAWWVSS TNCPGKAKAN DATNPWRLKR TATAAEISQF ... see all
WZA_ECOLI
P0A930
wza
Outer Membrane Lipoprotein, Peripheral outer membrane protein facing the extra-cellular space
I, F4
Cell outer membrane | Multi-pass membrane protein
SEC
LipoP
12.393
Predicted
 
MMKSKMKLMP LLVSVTLISG

CTVLPGSNMS TMGKDVIKQQ DADFDLDKMV NVYPLTPRLI DQLRPRPNVA RPNMTLESEI ... see all
CSGG_ECOLI
P0AEA2
csgG
Outer Membrane Lipoprotein, Peripheral outer membrane protein facing the extra-cellular space
I, F4
Cell membrane | Lipid-anchor
SEC
LipoP
12.916
Predicted
 
MQRLFLLVAV MLLSG

CLTAPPKEAA RPTLMPRAQS YKDLTHLPAP TGKIFVSVYN IQDETGQFKP YPASNFSTAV ... see all
LPP_ECOLI
P69776
lpp
Outer Membrane Lipoprotein, Peripheral outer membrane protein facing the extra-cellular space
I, F4
Cell outer membrane | Lipid-anchorCell outer membrane | Peptidoglycan-anchor
SEC
LipoP
00.325
Experimental
MKATKLVLGA VILGSTLLAG

CSSNAKIDQL SSDVQTLNAK VDQLSNDVNA MRSDVQAAKD DAARANQRLD NMATKYRK] ... see all
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