STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Sequences of Sec exported proteins in E.coli K-12 (MG1655)  Export to Excel  Export to CSV  

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Sequences of Sec exported proteins in E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Full Name
ID
Uniprot
Export System
Prediction
Tool
Prediction
Score
Evidence of Signal Peptide
(Experimental/Predicted)
References
Signal Peptide /
Mature Domain
YPDI_ECOLI
O32528
ypdI
Outer Membrane Lipoprotein
I
Cell membrane | Lipid-anchor
SEC
LipoP
00.415
Predicted
 
MKVNLILFSL FLLVSIMA

CNVFAFSISG GGSERSYKET EKTSAMTTTH STKLQPSQAI LFKMREDAPP LNLTEEMPPP ... see all
YFIB_ECOLI
P07021
yfiB
Outer Membrane Lipoprotein
I
Cell membrane | Lipid-anchor
SEC
LipoP
18.876
Predicted
 
MIKHLVAPLV FTSLILTG

CQSPQGKFTP EQVAAMQSYG FTESAGDWSL GLSDAILFAK NDYKLLPESQ QQIQTMAAKL ... see all
FLGH_ECOLI
P0A6S0
flgH
Outer Membrane Lipoprotein
I
Cell outer membrane | Lipid-anchorBacterial flagellum basal body
SEC
LipoP
17.071
Predicted
 
MQKNAAHTYA ISSLLVLSLT G

CAWIPSTPLV QGATSAQPVP GPTPVANGSI FQSAQPINYG YQPLFEDRRP RNIGDTLTIV ... see all
BLC_ECOLI
P0A901
blc
Outer Membrane Lipoprotein
I
Cell outer membrane | Lipid-anchor
SEC
LipoP
14.624
Predicted
 
MRLLPLVAAA TAAFLVVA

CSSPTPPRGV TVVNNFDAKR YLGTWYEIAR FDHRFERGLE KVTATYSLRD DGGLNVINKG ... see all
BAMC_ECOLI
P0A903
nlpB
Outer Membrane Lipoprotein
I
Cell outer membrane | Lipid-anchor
SEC
LipoP
17.245
Predicted
 
MAYSVQKSRL AKVAGVSLVL LLAA

CSSDSRYKRQ VSGDEAYLEA APLAELHAPA GMILPVTSGD YAIPVTNGSG AVGKALDIRP ... see all
SLYB_ECOLI
P0A905
slyB
Outer Membrane Lipoprotein
I
Cell outer membrane | Lipid-anchor
SEC
LipoP
19.905
Predicted
 
MIKRVLVVSM VGLSLVG

CVNNDTLSGD VYTASEAKQV QNVSYGTIVN VRPVQIQGGD DSNVIGAIGG AVLGGFLGNT ... see all
PAL_ECOLI
P0A912
pal
Outer Membrane Lipoprotein
I
Cell outer membrane | Lipid-anchor
SEC
LipoP
21.666
Predicted
 
MQLNKVLKGL MIALPVMAIA A

CSSNKNASND GSEGMLGAGT GMDANGGNGN MSSEEQARLQ MQQLQQNNIV YFDLDKYDIR ... see all
WZA_ECOLI
P0A930
wza
Outer Membrane Lipoprotein, Peripheral outer membrane protein facing the extra-cellular space
I, F4
Cell outer membrane | Multi-pass membrane protein
SEC
LipoP
12.393
Predicted
 
MMKSKMKLMP LLVSVTLISG

CTVLPGSNMS TMGKDVIKQQ DADFDLDKMV NVYPLTPRLI DQLRPRPNVA RPNMTLESEI ... see all
GFCE_ECOLI
P0A932
gfcE
Outer Membrane Lipoprotein
I
Cell outer membrane | Multi-pass membrane protein
SEC
LipoP
15.093
Predicted
 
MKKNIFKFSV LTLAVLSLTA

CTLVPGQNLS TSNKDVIELP DNQYDLDKMV NIYPVTPGLI DQLRAKPIMS QANPELEQQI ... see all
MLTA_ECOLI
P0A935
mltA
Outer Membrane Lipoprotein
I
Cell outer membrane | Lipid-anchor
SEC
LipoP
22.736
Predicted
 
MKGRWVKYLL MGTVVAMLAA

CSSKPTDRGQ QYKDGKFTQP FSLVNQPDAV GAPINAGDFA EQINHIRNSS PRLYGNQSNV ... see all
BAME_ECOLI
P0A937
smpA
Outer Membrane Lipoprotein
I
Cell outer membrane | Lipid-anchor
SEC
LipoP
19.000
Predicted
 
MRCKTLTAAA AVLLMLTAG

CSTLERVVYR PDINQGNYLT ANDVSKIRVG MTQQQVAYAL GTPLMSDPFG TNTWFYVFRQ ... see all
 
 
panE
Outer Membrane Lipoprotein
I
Cytoplasm
 
 
 
 
 
 
YEAY_ECOLI
P0AA91
yeaY
Outer Membrane Lipoprotein
I
Cell membrane | Lipid-anchor
SEC
LipoP
14.061
Predicted
 
MAVQKNVIKG ILAGTFALML SG

CVTVPDAIKG SSPTPQQDLV RVMSAPQLYV GQEARFGGKV VAVQNQQGKT RLEIATVPLD ... see all
YCEB_ECOLI
P0AB26
yceB
Outer Membrane Lipoprotein
I
Cell membrane | Lipid-anchor
SEC
LipoP
16.492
Predicted
 
MNKFLFAAAL IVSGLLVG

CNQLTQYTIT EQEINQSLAK HNNFSKDIGL PGVADAHIVL TNLTSQIGRE EPNKVTLTGD ... see all
YCEK_ECOLI
P0AB31
yceK
Outer Membrane Lipoprotein
I
 
SEC
LipoP
00.129
Predicted
 
MRLIVVSIMV TLLSG

CGSIISRTIP GQGHGNQYYP GVQWDVRDSA WRYVTILDLP FSLVFDTLLL PIDIHHGPYE ... see all
LPOB_ECOLI
P0AB38
lpoB
Outer Membrane Lipoprotein
I
 
SEC
LipoP
23.775
Predicted
 
MTKMSRYALI TALAMFLAG

CVGQREPAPV EEVKPAPEQP AEPQQPVPTV PSVPTIPQQP GPIEHEDQTA PPAPHIRHYD ... see all
BAMD_ECOLI
P0AC02
bamD
Outer Membrane Lipoprotein
I
Cell outer membrane | Lipid-anchor
SEC
LipoP
27.016
Predicted
 
MTRMKYLVAA ATLSLFLAG

CSGSKEEVPD NPPNEIYATA QQKLQDGNWR QAITQLEALD NRYPFGPYSQ QVQLDLIYAY ... see all
YDBJ_ECOLI
P0ACW2
ydbJ
Outer Membrane Lipoprotein
I
 
SEC
LipoP
00.374
Predicted
 
MRAAFWVGCA ALLLSA

CSSEPVQQAT AAHVAPGLKA SMSSSGEANC AMIGGSLSVA RQLDGTAIGM CALPNGKRCS ... see all
NLPD_ECOLI
P0ADA3
nlpD
Outer Membrane Lipoprotein
I
Cell inner membrane | Lipid-anchor
SEC
LipoP
21.904
Predicted
 
MSAGSPKFTV RRIAALSLVS LWLAG

CSDTSNPPAP VSSVNGNAPA NTNSGMLITP PPKMGTTSTA QQPQIQPVQQ PQIQATQQPQ ... see all
YAJG_ECOLI
P0ADA5
yajG
Outer Membrane Lipoprotein
I
Cell membrane | Lipid-anchor
SEC
LipoP
19.040
Predicted
 
MFKKILFPLV ALFMLAG

CAKPPTTIEV SPTITLPQQD PSLMGVTVSI NGADQRTDQA LAKVTRDNQI VTLTASRDLR ... see all
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