STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec membranome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec membranome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
TOLR_ECOLI
P0ABV6
tolR
b0738 JW0728
Protein tolR
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Single-pass type II membrane protein
Membrane anchored (Experimental)
 
SRP
SEC
 
 
yes
yes
FLIL_ECOLI
P0ABX8
fliL

cheC1 fla AI fla QI

b1944 JW1928
Flagellar protein FliL
Integral Inner Membrane
B
Soluble IM Fraction
Cell inner membrane | Single-pass membrane protein
Outer membrane Lipoprotein
 
SRP
SEC
 
 
no
yes
FLIQ_ECOLI
P0AC07
fliQ

flaQ

b1949 JW1933
Flagellar biosynthetic protein FliQ
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane proteinBacterial flagellum basal body
Integral Membrane Protein
flagellum
SRP
SEC
 
 
no
yes
YIHY_ECOLI
P0A8K8
yihY
b3886 JW3857 b2268
UPF0761 membrane protein yihY
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Cytoplasmic
 
SRP
SEC
 
 
yes
yes
FRDC_ECOLI
P0A8Q0
frdC
b4152 JW4113
Fumarate reductase subunit C (Fumarate reductase 15 kDa hydrophobic protein)
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
FRDD_ECOLI
P0A8Q3
frdD
b4151 JW4112
Fumarate reductase subunit D (Fumarate reductase 13 kDa hydrophobic protein)
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YCJF_ECOLI
P0A8R7
ycjF
b1322 JW1315
UPF0283 membrane protein ycjF
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
PGPB_ECOLI
P0A924
pgpB
b1278 JW1270
Phosphatidylglycerophosphatase B (EC 3.1.3.27)
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane proteinCell outer membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YAAH_ECOLI
P0AC98
yaaH
b0010 JW0009
Inner membrane protein yaaH
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YEAL_ECOLI
P0ACY6
yeaL
b1789 JW1778
UPF0756 membrane protein yeaL
Integral Inner Membrane
B
IM (predicted)
Cell membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
YOHC_ECOLI
P0AD17
yohC
b2135 JW5356
Inner membrane protein yohC
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
PLAP_ECOLI
P0AA47
plaP

yeeF

b2014 JW5330
Inner membrane transport protein yeeF
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YFDV_ECOLI
P0AA49
yfdV
b2372 JW2369
Uncharacterized transporter yfdV
Integral Inner Membrane
B
IM (predicted)
Cell membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
no
yes
QMCA_ECOLI
P0AA53
qmcA

ybbK

b0489 JW0478
Protein QmcA
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Single-pass type I membrane protein
Membrane anchored
 
SRP
SEC
 
 
yes
yes
YGHB_ECOLI
P0AA60
yghB
b3009 JW2976
Inner membrane protein yghB
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YQJA_ECOLI
P0AA63
yqjA
b3095 JW3066
Inner membrane protein yqjA
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YOHK_ECOLI
P0AD19
yohK
b2142 JW2130
Inner membrane protein yohK
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
no
yes
YPHA_ECOLI
P0AD47
yphA
b2543 JW2527
Inner membrane protein yphA
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
YJJB_ECOLI
P0ADD2
yjjB
b4363 JW4327
UPF0442 protein yjjB (Protein P-14)
Integral Inner Membrane
B
IM (predicted)
Cell membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YHHN_ECOLI
P0ADI9
yhhN
b3468 JW3433
Uncharacterized membrane protein yhhN
Integral Inner Membrane
B
IM (predicted)
Cell membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
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