STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec membranome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec membranome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
BCSF_ECOLI
P0ADJ5
bcsF

yhjT

b3537 JW5663
integral IM protein (SEC in IM), Cellulose biosynthesis BcsF
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Membrane anchored
 
SRP
SEC
 
 
no
yes
YIAA_ECOLI
P0ADJ8
yiaA
b3562 JW3534
integral IM protein (SEC in IM), YiaA
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
YIAW_ECOLI
P0ADK4
yiaW
b3587 JW3559
integral IM protein (SEC in IM), YiaW
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YICN_ECOLI
P0ADL3
yicN
b3663 JW5637
integral IM protein (SEC in IM), YicN
Integral Inner Membrane
B
N/A
 
Membrane anchored
 
SRP
SEC
 
 
yes
yes
GPMB_ECOLI
P0A7A2
gpmB

ytjC

b4395 JW4358
integral IM protein (SEC in IM), Probable phosphoglycerate mutase GpmB
Integral Inner Membrane
B
N/A
 
Membrane anchored
 
SRP
SEC
 
 
no
yes
DCTA_ECOLI
P0A830
dctA
b3528 JW3496
integral IM protein (SEC-YidC in IM), Aerobic C4-dicarboxylate transport protein DctA
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC-YidC
 
 
no
yes
TATE_ECOLI
P0A843
tatE

ybeC

b0627 JW0622
integral IM protein (SEC in IM), Sec-independent translocase TatE
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Membrane anchored
 
SRP
SEC
 
 
yes
yes
ZUPT_ECOLI
P0A8H3
zupT

ygiE

b3040 JW3008
integral IM protein (SEC in IM), Zinc transporter ZupT
Integral Inner Membrane
B
IM (predicted)
Cell membrane
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YIHY_ECOLI
P0A8K8
yihY
b3886 JW3857 b2268
integral IM protein (SEC in IM), UPF0761 YihY
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Cytoplasmic
 
SRP
SEC
 
 
yes
yes
YIDG_ECOLI
P0ADL6
yidG
b3675 JW3651
integral IM protein (SEC in IM), YidG
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YIDH_ECOLI
P0ADM0
yidH
b3676 JW3652
integral IM protein (SEC in IM), YidH
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YGAM_ECOLI
P0ADQ7
ygaM
b2672 JW2647
integral IM protein (SEC in IM), YgaM
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Membrane anchored
 
SRP
SEC
 
 
no
yes
YQAE_ECOLI
P0AE42
yqaE
b2666 JW2641
integral IM protein (SEC in IM), UPF0057 YqaE
Integral Inner Membrane
B
IM (predicted)
Cell membrane
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
FRDC_ECOLI
P0A8Q0
frdC
b4152 JW4113
integral IM protein (SEC in IM), Fumarate reductase subunit C FrdC
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
FRDD_ECOLI
P0A8Q3
frdD
b4151 JW4112
integral IM protein (SEC in IM), Fumarate reductase subunit D FrdD
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YCJF_ECOLI
P0A8R7
ycjF
b1322 JW1315
integral IM protein (SEC in IM), UPF0283 YcjF
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
PGPB_ECOLI
P0A924
pgpB
b1278 JW1270
integral IM protein (SEC in IM), Phosphatidylglycerophosphatase B PgpB
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YJIG_ECOLI
P0AEH8
yjiG
b4329 JW4292
integral IM protein (SEC in IM), YjiG
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
YIIR_ECOLI
P0AF34
yiiR
b3921 JW3892
integral IM protein (SEC in IM), YiiR
Integral Inner Membrane
B
IM (predicted)
 
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YIJD_ECOLI
P0AF40
yijD
b3964 JW3936
integral IM protein (SEC in IM), YijD
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
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