STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec membranome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec membranome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
RHTA_ECOLI
P0AA67
rhtA

ybiF

b0813 JW0798
Inner membrane transporter rhtA
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
YEDA_ECOLI
P0AA70
yedA
b1959 JW1942
Uncharacterized inner membrane transporter yedA
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
YHBE_ECOLI
P0AA73
yhbE
b3184 JW3151
Uncharacterized inner membrane transporter yhbE
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
DGOT_ECOLI
P0AA76
dgoT

yidT

b3691 JW5859
D-galactonate transporter
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
YidC
 
 
yes
yes
EXUT_ECOLI
P0AA78
exuT
b3093 JW3064
Hexuronate transporter
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YHJT_ECOLI
P0ADJ5
yhjT

yhjT

b3537 JW5663
Uncharacterized protein yhjT
Integral Inner Membrane
B
IM (predicted)
 
Membrane anchored
 
SRP
SEC
 
 
no
yes
YIAA_ECOLI
P0ADJ8
yiaA
b3562 JW3534
Inner membrane protein yiaA
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
YIAW_ECOLI
P0ADK4
yiaW
b3587 JW3559
Inner membrane protein yiaW
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
GARP_ECOLI
P0AA80
garP

yhaU

b3127 JW3096
Probable galactarate transporter (D-galactarate permease)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
CODB_ECOLI
P0AA82
codB
b0336 JW0327
Cytosine permease
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
YidC
 
 
no
yes
DSBE_ECOLI
P0AA86
dsbE

ccmG yejQ

b2195 JW2183
Thiol:disulfide interchange protein dsbE (Cytochrome c biogenesis protein CcmG)
Integral Inner Membrane
B
N/A
Cell inner membrane | Single-pass membrane protein | Periplasmic side
Periplasmic with N-terminal membrane anchor (Experimental)
 
SRP
SEC
 
 
yes
yes
YPDA_ECOLI
P0AA93
ypdA
b2380 JW5388
Inner membrane protein ypdA
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YICN_ECOLI
P0ADL3
yicN
b3663 JW5637
Uncharacterized protein yicN
Integral Inner Membrane
B
N/A
 
Membrane anchored
 
SRP
SEC
 
 
yes
yes
YIDG_ECOLI
P0ADL6
yidG
b3675 JW3651
Inner membrane protein yidG
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YIDH_ECOLI
P0ADM0
yidH
b3676 JW3652
Inner membrane protein yidH
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YGAM_ECOLI
P0ADQ7
ygaM
b2672 JW2647
Uncharacterized protein ygaM
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
 
Membrane anchored
 
SRP
SEC
 
 
no
yes
YAGU_ECOLI
P0AAA1
yagU
b0287 JW0281
Inner membrane protein yagU
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
WZXE_ECOLI
P0AAA7
wzxE

wzx yifJ

b3792 JW3766
Protein wzxE
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YBHL_ECOLI
P0AAC4
ybhL
b0786 JW0769
Inner membrane protein ybhL
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YCCA_ECOLI
P0AAC6
yccA
b0970 JW0953
Modulator of FtsH protease YccA
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
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