STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec membranome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec membranome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
MTR_ECOLI
P0AAD2
mtr
b3161 JW3130
Tryptophan-specific transport protein (Tryptophan permease)
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
YGDD_ECOLI
P0ADR2
ygdD
b2807 JW2778
UPF0382 inner membrane protein ygdD
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YQAE_ECOLI
P0AE42
yqaE
b2666 JW2641
UPF0057 membrane protein yqaE
Integral Inner Membrane
B
IM (predicted)
Cell membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
YJIG_ECOLI
P0AEH8
yjiG
b4329 JW4292
Inner membrane protein yjiG
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
YIIR_ECOLI
P0AF34
yiiR
b3921 JW3892
Uncharacterized protein yiiR
Integral Inner Membrane
B
IM (predicted)
 
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
TYRP_ECOLI
P0AAD4
tyrP
b1907 JW1895
Tyrosine-specific transport protein (Tyrosine permease)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
SDAC_ECOLI
P0AAD6
sdaC

dcrA

b2796 JW2767
Serine transporter
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
TDCC_ECOLI
P0AAD8
tdcC
b3116 JW3087
Threonine/serine transporter tdcC (H(+)/threonine-serine symporter)
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
YfgM
 
yes
yes
CYCA_ECOLI
P0AAE0
cycA

dagA ytfD

b4208 JW4166
D-serine/D-alanine/glycine transporter
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
YidC
 
 
yes
yes
YIJD_ECOLI
P0AF40
yijD
b3964 JW3936
Inner membrane protein yijD
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YJCH_ECOLI
P0AF54
yjcH
b4068 JW4029
Inner membrane protein yjcH
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YJET_ECOLI
P0AF73
yjeT
b4176 JW4134
Uncharacterized protein yjeT
Integral Inner Membrane
B
IM (predicted)
Cell membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
YJFL_ECOLI
P0AF80
yjfL
b4184 JW4142
UPF0719 inner membrane protein yjfL
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
PROY_ECOLI
P0AAE2
proY

yajM

b0402 JW5055
Proline-specific permease proY
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
ARCD_ECOLI
P0AAE5
ydgI
b1605 JW1597
Putative arginine/ornithine antiporter
Nucleoid, Integral Inner Membrane
N, B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein.
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
CADB_ECOLI
P0AAE8
cadB
b4132 JW4093
Probable cadaverine/lysine antiporter
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
YidC
 
 
yes
yes
POTE_ECOLI
P0AAF1
potE
b0692 JW0679
Putrescine-ornithine antiporter (Putrescine transport protein)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
PSPB_ECOLI
P0AFM9
pspB
b1305 JW1298
Uncharacterized protein yqeK
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Single-pass membrane protein
Membrane anchored
 
SRP
SEC
 
 
no
yes
PSPC_ECOLI
P0AFN2
pspC
b1306 JW1299
Phage shock protein C
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Single-pass membrane protein
Membrane anchored
 
SRP
SEC
 
 
yes
no
YADS_ECOLI
P0AFP0
yadS
b0157 JW0153
UPF0126 inner membrane protein yadS
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
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