STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec membranome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec membranome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
ATPZ_ECOLI
P0ABC0
atpI

uncI

b3739 JW5611
integral IM protein (SEC-YidC in IM), ATP synthase I AtpI
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC-YidC
 
 
yes
yes
HFLC_ECOLI
P0ABC3
hflC

hflA

b4175 JW4133
integral IM protein (SEC in IM), Modulator of FtsH protease HflC
Integral Inner Membrane
B
Soluble IM Fraction
Cell inner membrane
Membrane anchored (Experimental)
 
SRP
SEC
 
 
yes
yes
HFLK_ECOLI
P0ABC7
hflK

hflA

b4174 JW4132
integral IM protein (SEC in IM), Modulator of FtsH protease HflK
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Membrane anchored
 
SRP
SEC
 
 
yes
no
BETT_ECOLI
P0ABC9
betT
b0314 JW0306
integral IM protein (SEC in IM), High-affinity choline transport protein BetT
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
YGAH_ECOLI
P43667
ygaH
b2683 JW2658
integral IM protein (SEC in IM), YgaH
Integral Inner Membrane
B
IM (predicted)
 
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YHDT_ECOLI
P45566
yhdT
b3257 JW3225
integral IM protein (SEC in IM), YhdT
Integral Inner Membrane
B
IM (predicted)
Cell membrane
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YBCI_ECOLI
P45570
ybcI
b0527 JW0516
integral IM protein (SEC in IM), YbcI
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
YEAV_ECOLI
P0ABD1
yeaV
b1801 JW5293
integral IM protein (SEC in IM), transporter YeaV
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
C561_ECOLI
P0ABE5
cybB
b1418 JW5224
integral IM protein (SEC-YidC in IM), Cytochrome b561 CybB
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC-YidC
 
 
no
yes
PGSA_ECOLI
P0ABF8
pgsA
b1912 JW1897
integral IM protein (SEC in IM), CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP (exp)
SEC
 
 
yes
yes
CDSA_ECOLI
P0ABG1
cdsA

cds

b0175 JW5810
integral IM protein (SEC in IM), Phosphatidate cytidylyltransferase CdsA
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP (exp)
SEC
 
 
yes
yes
FTSW_ECOLI
P0ABG4
ftsW
b0089 JW0087
integral IM protein (SEC in IM), Probable PG glycosyltransferase FtsW
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
HOFO_ECOLI
P45751
hofO

yrfB

b3393 JW3356
integral IM protein (SEC in IM), DNA utilization HofO
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Membrane anchored
 
SRP
SEC
 
 
yes
yes
YBJC_ECOLI
P46119
ybjC
b0850 JW0834
integral IM protein (SEC in IM), YbjC
Integral Inner Membrane
B
IM (predicted)
 
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
RODA_ECOLI
P0ABG7
mrdB

rodA

b0634 JW0629
integral IM protein (SEC in IM), PG glycosyltransferase MrdB
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
CORA_ECOLI
P0ABI4
corA
b3816 JW3789
integral IM protein (SEC-YidC in IM), Magnesium transport CorA
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC-YidC
 
 
yes
yes
CYOB_ECOLI
P0ABI8
cyoB
b0431 JW0421
integral IM protein (SEC-YidC in IM), Cytochrome bo(3) ubiquinol oxidase subunit 1 CyoB
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC-YidC
 
 
yes
yes
CYOA_ECOLI
P0ABJ1
cyoA
b0432 JW0422
integral IM protein (SEC in IM), Cytochrome bo(3) ubiquinol oxidase subunit 2 CyoA
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YGBE_ECOLI
P46141
ygbE
b2749 JW2719
integral IM protein (SEC in IM), YgbE
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
CYOC_ECOLI
P0ABJ3
cyoC
b0430 JW0420
integral IM protein (SEC in IM), Cytochrome bo(3) ubiquinol oxidase subunit 3 CyoC
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
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 ©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: February 2019.