STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec membranome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec membranome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
RODA_ECOLI
P0ABG7
mrdB

rodA

b0634 JW0629
Rod shape-determining protein rodA
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
CORA_ECOLI
P0ABI4
corA
b3816 JW3789
Magnesium transport protein CorA
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
YidC
 
 
yes
yes
CYOB_ECOLI
P0ABI8
cyoB
b0431 JW0421
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Cytochrome o subunit 1) (Cytochrome o ubiquinol oxidase subunit 1) (Oxidase BO(3) subunit 1) (Ubiquinol oxidase chain A) (Ubiquinol oxidase polypeptide I)
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
YidC
 
 
yes
yes
FXSA_ECOLI
P37147
fxsA

yjeG

b4140 JW4100
UPF0716 protein fxsA (Suppressor of F exclusion of phage T7)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
HOKA_ECOLI
P37305
hokA

yiaZ

b4455 JW3526
Protein hokA
Integral Inner Membrane
B
IM (predicted)
Membrane | Single-pass membrane protein
Membrane anchored
 
SRP
SEC
 
 
no
yes
YHHL_ECOLI
P37614
yhhL
b3466 JW5683
Uncharacterized protein yhhL
Integral Inner Membrane
B
IM (predicted)
 
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
CYOA_ECOLI
P0ABJ1
cyoA
b0432 JW0422
Ubiquinol oxidase subunit 2 (EC 1.10.3.-) (Cytochrome o subunit 2) (Cytochrome o ubiquinol oxidase subunit 2) (Ubiquinol oxidase chain B) (Oxidase BO(3) subunit 2) (Ubiquinol oxidase polypeptide II)
Integral Inner Membrane, Inner Membrane Lipoprotein
B, E
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
CYOC_ECOLI
P0ABJ3
cyoC
b0430 JW0420
Cytochrome o ubiquinol oxidase subunit 3 (EC 1.10.3.-) (Cytochrome o ubiquinol oxidase subunit III) (Ubiquinol oxidase chain C)
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
CYDA_ECOLI
P0ABJ9
cydA

cyd-1

b0733 JW0722
Cytochrome d ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Cytochrome bd-I oxidase subunit I) (Cytochrome d ubiquinol oxidase subunit I)
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP (exp)
SEC
 
 
yes
yes
YHHM_ECOLI
P37615
yhhM
b3467 JW3432
Uncharacterized protein yhhM
Integral Inner Membrane
B
N/A
 
Membrane anchored
 
SRP
SEC
 
 
yes
yes
YHHQ_ECOLI
P37619
yhhQ
b3471 JW3436
Inner membrane protein yhhQ
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YIAM_ECOLI
P37674
yiaM
b3577 JW3549
2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
CYDB_ECOLI
P0ABK2
cydB

cyd-2

b0734 JW0723
Cytochrome d ubiquinol oxidase subunit 2 (EC 1.10.3.-) (Cytochrome bd-I oxidase subunit II) (Cytochrome d ubiquinol oxidase subunit II)
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP (exp)
SEC
 
 
yes
yes
NAPC_ECOLI
P0ABL5
napC

yejX

b2202 JW2190
Cytochrome c-type protein napC
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Single-pass membrane protein
Periplasmic with N-terminal membrane anchor (Experimental)
 
SRP
SEC
 
 
yes
yes
CCMB_ECOLI
P0ABL8
ccmB

yejV

b2200 JW2188
Heme exporter protein B (Cytochrome c-type biogenesis protein CcmB)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
YidC
 
 
yes
yes
CCMC_ECOLI
P0ABM1
ccmC

yejT yejU

b2199 JW2187
Heme exporter protein C (Cytochrome c-type biogenesis protein CcmC)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
YidC
 
 
no
yes
CCMH_ECOLI
P0ABM9
ccmH

yejP

b2194 JW2182
Cytochrome c-type biogenesis protein CcmH
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP (exp)
SEC
 
 
yes
yes
SIEB_ECOLI
P38392
sieB
b1353 JW5209
Superinfection exclusion protein B
Integral Inner Membrane
B
IM (predicted)
Membrane | Peripheral membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
no
YJEO_ECOLI
P39284
yjeO
b4158 JW4119
Toxin yoeB (EC 3.1.-.-)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
KDGL_ECOLI
P0ABN1
dgkA
b4042 JW4002
Diacylglycerol kinase (DAGK) (EC 2.7.1.107) (Diglyceride kinase) (DGK)
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
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