STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec membranome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

 Search
    

E.coli K-12 (MG1655) Sec membranome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
PTM3C_ECOLI
P00550
mtlA
b3599 JW3573
PTS system mannitol-specific EIICBA component (EIICBA-Mtl) (EII-Mtl) [Includes: Mannitol permease IIC component (PTS system mannitol-specific EIIC component); Mannitol-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system mannitol-spe
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP (exp)
SEC
 
 
yes
yes
LEP_ECOLI
P00803
lepB
b2568 JW2552
Signal peptidase I (SPase I) (EC 3.4.21.89) (Leader peptidase I)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
 
YidC
 
 
yes
yes
LSPA_ECOLI
P00804
lspA
b0027 JW0025
Lipoprotein signal peptidase (EC 3.4.23.36) (Prolipoprotein signal peptidase) (Signal peptidase II) (SPase II)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
MALF_ECOLI
P02916
malF
b4033 JW3993
Maltose transport system permease protein malF
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein | Periplasmic side
Integral Membrane Protein
 
SRP (exp)
SEC
YfgM
 
no
yes
PBPA_ECOLI
P02918
mrcA

ponA

b3396 JW3359
Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
Integral Inner Membrane
B
Soluble IM Fraction
Cell inner membrane | Single-pass type II membrane protein
Membrane anchored (Experimental)
 
SRP
SEC
 
 
yes
yes
GSPB_ECOLI
P03825
gspB

pinO pioO pno

b3322 JW3284
Putative general secretion pathway protein B
Integral Inner Membrane
B
IM (predicted)
 
Membrane anchored
 
SRP
SEC
 
 
no
yes
PBPB_ECOLI
P02919
mrcB

pbpF ponB

b0149 JW0145
Penicillin-binding protein 1B (PBP-1b) (PBP1b) (Murein polymerase) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.1.129) (Peptidoglycan TGase) (Peptidoglycan glycosyltransferase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpepti
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Single-pass type II membrane protein
Membrane anchored
 
SRP
SEC
 
 
yes
yes
LACY_ECOLI
P02920
lacY
b0343 JW0334
Lactose permease (Lactose-proton symport)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
MELB_ECOLI
P02921
melB

mel-4

b4120 JW4081
Melibiose carrier protein (Melibiose permease) (Melibiose transporter) (Na+ (Li+)/melibiose symporter) (Thiomethylgalactoside permease II)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
PPDB_ECOLI
P08371
ppdB

ygdC

b2825 JW5451
Prepilin peptidase-dependent protein B
Integral Inner Membrane
B
IM (predicted)
 
Membrane anchored
 
SRP
SEC
 
 
yes
yes
PPDC_ECOLI
P08372
ppdC

ygdA

b2823 JW2791
Prepilin peptidase-dependent protein C
Integral Inner Membrane
B
IM (predicted)
 
Membrane anchored
 
SRP
SEC
 
 
yes
yes
CVPA_ECOLI
P08550
cvpA

dedE

b2313 JW2310
Colicin V production protein (Protein dedE) (Pur regulon 18 kDa protein)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
TONB_ECOLI
P02929
tonB

exbA

b1252 JW5195
Protein tonB
Integral Inner Membrane
B
N/A
Cell inner membrane | Single-pass membrane protein | Periplasmic side
Membrane anchored
 
 
SEC
 
 
yes
yes
MCP1_ECOLI
P02942
tsr

cheD

b4355 JW4318
Methyl-accepting chemotaxis protein I (MCP-I) (Serine chemoreceptor protein)
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
KEFC_ECOLI
P03819
kefC

trkC

b0047 JW0046
Glutathione-regulated potassium-efflux system protein kefC (K(+)/H(+) antiporter)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
ATKA_ECOLI
P03959
kdpA
b0698 JW0686
Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
FTSB_ECOLI
P0A6S5
ftsB

ygbQ

b2748 JW2718
Cell division protein ftsB
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Single-pass type II membrane protein
Membrane anchored
 
SRP
SEC
 
 
yes
yes
ISPZ_ECOLI
P0A710
yciB

ispZ

b1254 JW1246
Probable intracellular septation protein
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
RNFA_ECOLI
P0A766
rnfA

ydgL

b1627 JW1619
Electron transport complex protein rnfA
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein(experimental)
 
SRP
SEC
 
 
yes
yes
ATKB_ECOLI
P03960
kdpB
b0697 JW0685
Potassium-transporting ATPase B chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] B chain) (Potassium-binding and translocating subunit B) (Potassium-translocating ATPase B chain)
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
First  Previous  1  2  3  4  5  6  7  8  9  10  11-20  Next  Last       Records 21 to 40 of 969     
Page Size 

 

 ©2015 e. Economou Lab