STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Sec membranome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Sec membranome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
KDPC_ECOLI
P03961
kdpC
b0696 JW0684
integral IM protein (SEC in IM), Potassium-transporting ATPase KdpC subunit KdpC
Integral Inner Membrane
B
N/A
Cell inner membrane
Membrane anchored
 
SRP
SEC
 
 
no
yes
MCP3_ECOLI
P05704
trg
b1421 JW1417
integral IM protein (SEC in IM), Methyl-accepting chemotaxis III Trg
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
FTSQ_ECOLI
P06136
ftsQ
b0093 JW0091
integral IM protein (SEC in IM), Cell division FtsQ
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Membrane anchored
 
SRP
SEC
 
 
yes
yes
ESSD_ECOLI
P0A9R2
essD

ybcR

b0554 JW0543
integral IM protein (SEC in IM), Prophage lysis S homolog EssD
Integral Inner Membrane
B
IM (predicted)
 
Integral Membrane Protein
 
SRP
SEC
 
 
yes
no
YMCE_ECOLI
P0AAA5
ymcE

sfa

b0991 JW0975
integral IM protein (SEC in IM), YmcE
Integral Inner Membrane
B
N/A
Cell membrane
Membrane anchored
 
SRP
SEC
 
 
no
yes
YAIY_ECOLI
P0AAP7
yaiY
b0379 JW0370
integral IM protein (SEC in IM), YaiY
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
BTUC_ECOLI
P06609
btuC
b1711 JW1701
integral IM protein (SEC-YidC in IM), Vitamin B12 import system permease BtuC
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC-YidC
 
 
yes
yes
BIRA_ECOLI
P06709
birA

bioR dhbB

b3973 JW3941
nucleoid & integral IM protein (SEC in IM), Bifunctional ligase/repressor BirA
Integral Inner Membrane, Nucleoid
B, N
IM (predicted)
 
Cytoplasmic
 
SRP
SEC
 
 
yes
yes
FHUB_ECOLI
P06972
fhuB
b0153 JW0149
integral IM protein (SEC in IM), Iron(3+)-hydroxamate import system permease FhuB
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
PNTA_ECOLI
P07001
pntA
b1603 JW1595
integral IM protein (SEC in IM), PntA
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
YAIZ_ECOLI
P0AAQ0
yaiZ
b0380 JW5053
integral IM protein (SEC in IM), YaiZ
Integral Inner Membrane
B
IM (predicted)
Cell membrane
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YBAN_ECOLI
P0AAR5
ybaN
b0468 JW0457
integral IM protein (SEC in IM), YbaN
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
MCP2_ECOLI
P07017
tar

cheM

b1886 JW1875
integral IM protein (SEC in IM), Methyl-accepting chemotaxis II Tar
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
MCP4_ECOLI
P07018
tap
b1885 JW1874
integral IM protein (SEC in IM), Methyl-accepting chemotaxis IV Tap
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
PUTP_ECOLI
P07117
putP
b1015 JW1001
integral IM protein (SEC in IM), Sodium/proline symporter PutP
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
PSTA_ECOLI
P07654
pstA

phoT

b3726 JW3704
integral IM protein (SEC in IM), Phosphate transport system permease PstA
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YLAC_ECOLI
P0AAS0
ylaC
b0458 JW5063
integral IM protein (SEC in IM), YlaC
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YBFA_ECOLI
P0AAU2
ybfA
b0699 JW0688
integral IM protein (SEC in IM), YbfA
Integral Inner Membrane
B
IM (predicted)
 
Membrane anchored
 
SRP
SEC
 
 
no
yes
YBFB_ECOLI
P0AAU5
ybfB
b0702 JW0691
integral IM protein (SEC in IM), YbfB
Integral Inner Membrane
B
IM (predicted)
Cell membrane
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
GLPT_ECOLI
P08194
glpT
b2240 JW2234
integral IM protein (SEC in IM), Glycerol-3-phosphate transporter GlpT
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
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 ©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: February 2019.