STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) membranome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) membranome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
CODB_ECOLI
P0AA82
codB
b0336 JW0327
integral IM protein (SEC-YidC in IM), Cytosine permease CodB
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC-YidC
 
 
no
yes
DSBE_ECOLI
P0AA86
dsbE

ccmG yejQ

b2195 JW2183
integral IM protein (SEC in IM), Thiol:disulfide interchange DsbE
Integral Inner Membrane
B
N/A
Cell inner membrane; Single-pass membrane protein; Periplasmic side
Periplasmic with N-terminal membrane anchor (Experimental)
 
SRP
SEC
 
 
yes
yes
YPDA_ECOLI
P0AA93
ypdA
b2380 JW5388
integral IM protein (SEC in IM), Sensor histidine kinase YpdA
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
FLIO_ECOLI
P22586
fliO

flaP flbD

b1947 JW5316
Flagellar integral IM protein (SEC in IM), FliO
Integral Inner Membrane
B
IM (predicted)
Cell membrane
Membrane anchored
flagellum
SRP
SEC
 
 
no
yes
APPX_ECOLI
P24244
appX

yccB

b4592 JW0961.1 b0979.1
integral IM protein (SEC in IM), Putative cytochrome bd-II ubiquinol oxidase subunit AppX
Integral Inner Membrane
B
N/A
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
YIGF_ECOLI
P27842
yigF
b3817 JW3790
integral IM protein (SEC in IM), YigF
Integral Inner Membrane
B
IM (predicted)
 
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
YIGG_ECOLI
P27843
yigG
b3818 JW5590
integral IM protein (SEC in IM), YigG
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
YAGU_ECOLI
P0AAA1
yagU
b0287 JW0281
integral IM protein (SEC in IM), YagU
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
WZXE_ECOLI
P0AAA7
wzxE

wzx yifJ

b3792 JW3766
integral IM protein (SEC in IM), Lipid III flippase WzxE
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YBHL_ECOLI
P0AAC4
ybhL
b0786 JW0769
integral IM protein (SEC in IM), YbhL
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YCCA_ECOLI
P0AAC6
yccA
b0970 JW0953
integral IM protein (SEC in IM), Modulator of FtsH protease YccA
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
MTR_ECOLI
P0AAD2
mtr
b3161 JW3130
integral IM protein (SEC in IM), Tryptophan-specific transport Mtr
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
YHHH_ECOLI
P28911
yhhH
b3483 JW3449
integral IM protein (SEC in IM), YhhH
Integral Inner Membrane
B
IM (predicted)
 
Membrane anchored
 
SRP
SEC
 
 
no
yes
YIDI_ECOLI
P31446
yidI
b3677 JW3653
integral IM protein (SEC in IM), YidI
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
CBRB_ECOLI
P31468
cbrB

yieI

b3716 JW3694
integral IM protein (SEC in IM), CbrB
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
TYRP_ECOLI
P0AAD4
tyrP
b1907 JW1895
integral IM protein (SEC in IM), Tyrosine-specific transport TyrP
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
SDAC_ECOLI
P0AAD6
sdaC

dcrA

b2796 JW2767
integral IM protein (SEC in IM), Serine transporter SdaC
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
TDCC_ECOLI
P0AAD8
tdcC
b3116 JW3087
integral IM protein (SEC in IM), Threonine/serine transporter TdcC
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC
YfgM
 
yes
yes
CYCA_ECOLI
P0AAE0
cycA

dagA ytfD

b4208 JW4166
integral IM protein (SEC-YidC in IM), D-serine/D-alanine/glycine transporter CycA
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Integral Membrane Protein
 
SRP
SEC-YidC
 
 
yes
yes
YDCD_ECOLI
P31991
ydcD
b1457 JW1452
integral IM protein (SEC in IM), YdcD
Integral Inner Membrane
B
IM (predicted)
 
Membrane anchored
 
SRP
SEC
 
 
no
yes
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