STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) membranome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) membranome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
CRED_ECOLI
P08369
creD

cet

b4400 JW4363
integral IM protein (SEC-YidC in IM), CreD
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC-YidC
 
 
no
yes
SPPA_ECOLI
P08395
sppA
b1766 JW1755
integral IM protein (SEC in IM), Protease 4 SppA
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Membrane anchored
 
SRP
SEC
 
 
yes
yes
PHOR_ECOLI
P08400
phoR

nmpB

b0400 JW0390
integral IM protein (SEC in IM), Phosphate regulon sensor PhoR PhoR
Integral Inner Membrane
B
N/A
Cell inner membrane
Membrane anchored
 
SRP
SEC
 
 
yes
yes
YBGE_ECOLI
P0AAV0
ybgE
b0735 JW0725
integral IM protein (SEC in IM), YbgE
Integral Inner Membrane
B
IM (predicted)
 
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YBHQ_ECOLI
P0AAW5
ybhQ
b0791 JW0774
integral IM protein (SEC in IM), YbhQ
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
YBJO_ECOLI
P0AAZ0
ybjO
b0858 JW0842
integral IM protein (SEC in IM), YbjO
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
CREC_ECOLI
P08401
creC

phoM

b4399 JW4362
integral IM protein (SEC-YidC in IM), Sensor CreC
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC-YidC
 
 
yes
yes
CVPA_ECOLI
P08550
cvpA

dedE

b2313 JW2310
integral IM protein (SEC in IM), Colicin V production CvpA
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
DSDX_ECOLI
P08555
dsdX

orf445 yfdA yfdD

b2365 JW2362
integral IM protein (SEC in IM), D-serine transporter DsdX
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
no
yes
PTV3B_ECOLI
P08722
bglF

bglC bglS

b3722 JW3700
integral IM protein (SEC in IM), PTS system beta-glucoside-specific EIIBCA component BglF
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
no
yes
YCFJ_ECOLI
P0AB35
ycfJ
b1110 JW1096
integral IM protein (SEC in IM), YcfJ
Integral Inner Membrane
B
N/A
Membrane
Membrane anchored
 
SRP
SEC
 
 
yes
yes
YCHH_ECOLI
P0AB49
ychH
b1205 JW1196
integral IM protein (SEC in IM), YchH
Integral Inner Membrane
B
IM (predicted)
 
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
MRED_ECOLI
P0ABH4
mreD
b3249 JW3218
integral IM protein (SEC in IM), Rod shape-determining MreD
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
HEMX_ECOLI
P09127
hemX
b3803 JW3775
integral IM protein (SEC in IM), HemX
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Membrane anchored
 
SRP
SEC
 
 
no
yes
PTW3C_ECOLI
P09323
nagE

pstN

b0679 JW0665
integral IM protein (SEC in IM), PTS system N-acetylglucosamine-specific EIICBA component NagE
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Integral Membrane Protein (Experimental)
 
SRP
SEC
 
 
yes
yes
MOTA_ECOLI
P09348
motA

flaJ

b1890 JW1879
integral IM protein (SEC in IM), Motility A MotA
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Multi-pass membrane protein
Integral Membrane Protein
 
SRP
SEC
 
 
yes
yes
GLPG_ECOLI
P09391
glpG
b3424 JW5687
integral IM protein (SEC in IM), Rhomboid protease GlpG
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane
Integral Membrane Protein
 
SRP (exp)
SEC
 
 
yes
yes
CCMD_ECOLI
P0ABM5
ccmD

yojM

b2198 JW2186
integral IM protein (SEC in IM), Heme exporter D CcmD
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Membrane anchored
 
SRP
SEC
 
 
no
yes
EXBD_ECOLI
P0ABV2
exbD
b3005 JW2973
integral IM protein (SEC in IM), Biopolymer transport ExbD
Integral Inner Membrane
B
IM (predicted), Detected in IM Fraction
Cell inner membrane; Single-pass type II membrane protein
Membrane anchored
 
SRP
SEC
 
 
yes
yes
TOLR_ECOLI
P0ABV6
tolR
b0738 JW0728
integral IM protein (SEC in IM), Tol-Pal system TolR
Integral Inner Membrane
B
IM (predicted)
Cell inner membrane
Membrane anchored (Experimental)
 
SRP
SEC
 
 
yes
yes
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