STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
SGRT_ECOLI
C1P5Z7
sgrT
b4662 JW0068.1
cytoplasmic peripheral IM protein, Putative inhibitor of glucose uptake transporter SgrT
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
-
 
 
 
 
 
no
yes
YOBI_ECOLI
C1P604
yobI
b4677 JW1850.1
cytoplasmic peripheral IM protein, YobI
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
-
 
 
 
 
 
no
yes
AZUC_ECOLI
C1P605
azuC
b4663 JW1891.1
cytoplasmic peripheral IM protein, AzuC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell inner membrane
-
 
 
 
 
 
no
yes
YSHB_ECOLI
C1P620
yshB
b4686 JW3839.1
cytoplasmic peripheral IM protein, YshB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
-
 
 
 
 
 
no
yes
6PGD_ECOLI
P00350
gnd
b2029 JW2011
cytoplasmic peripheral IM protein, 6-phosphogluconate dehydrogenase, decarboxylating Gnd
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
FRDA_ECOLI
P00363
frdA
b4154 JW4115
cytoplasmic peripheral IM protein, Fumarate reductase flavosubunit FrdA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
yes
yes
YIDD_ECOLI
P0A8C8
yidD
b4557 JW3682
cytoplasmic peripheral IM protein, Putative insertion efficiency factor YidD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell inner membrane
Cytoplasmic
 
 
 
 
 
no
yes
DHNA_ECOLI
P00393
ndh
b1109 JW1095
cytoplasmic peripheral IM protein, NADH dehydrogenase Ndh
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
IM (predicted)
Cell membrane
Cytoplasmic
 
 
 
 
 
yes
yes
RIR1_ECOLI
P00452
nrdA
b2234 JW2228
cytoplasmic peripheral IM protein, Ribonucleoside-diphosphate reductase 1 subunit alpha NrdA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
TF
 
 
 
yes
yes
AAT_ECOLI
P00509
aspC
b0928 JW0911
cytoplasmic peripheral IM protein, Aspartate aminotransferase AspC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic (Experimental)
 
 
 
 
 
yes
yes
AK1H_ECOLI
P00561
thrA
b0002 JW0001
cytoplasmic peripheral IM protein, Bifunctional aspartokinase/homoserine dehydrogenase 1 ThrA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic (Experimental)
 
TF
 
 
 
yes
yes
GNSA_ECOLI
P0AC92
gnsA
b4517 JW0976
cytoplasmic peripheral IM protein, GnsA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
AK2H_ECOLI
P00562
metL
b3940 JW3911
cytoplasmic peripheral IM protein, Bifunctional aspartokinase/homoserine dehydrogenase 2 MetL
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
RPOD_ECOLI
P00579
rpoD
b3067 JW3039
cytoplasmic nucleoid peripheral IM protein, RNA polymerase sigma factor RpoD
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
DPO1_ECOLI
P00582
polA
b3863 JW3835
cytoplasmic nucleoid peripheral IM protein, DNA polymerase I PolA
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
YIFE_ECOLI
P0ADN2
yifE
b3764 JW3737
cytoplasmic peripheral IM protein, UPF0438 YifE
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
ZAPB_ECOLI
P0AF36
zapB
b3928 JW3899
cytoplasmic peripheral IM protein, Cell division ZapB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
no
yes
YGGL_ECOLI
P38521
yggL
b2959 JW2926
cytoplasmic peripheral IM protein, YggL
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
CAPP_ECOLI
P00864
ppc
b3956 JW3928
cytoplasmic peripheral IM protein, Phosphoenolpyruvate carboxylase Ppc
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
TRPE_ECOLI
P00895
trpE
b1264 JW1256
cytoplasmic peripheral IM protein, Anthranilate synthase component 1 TrpE
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
yes
yes
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