STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
GLGA_ECOLI
P0A6U8
glgA
b3429 JW3392
Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
HEM1_ECOLI
P0A6X1
hemA
b1210 JW1201
Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
HFQ_ECOLI
P0A6X3
hfq
b4172 JW4130
Protein hfq (HF-1) (Host factor-I protein) (HF-I)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
IHFA_ECOLI
P0A6X7
ihfA
b1712 JW1702
Integration host factor subunit alpha (IHF-alpha)
Nucleoid, Peripheral inner membrane protein facing the cytoplasm
N, F1
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
IHFB_ECOLI
P0A6Y1
ihfB
b0912 JW0895
Integration host factor subunit beta (IHF-beta)
Nucleoid, Peripheral inner membrane protein facing the cytoplasm
N, F1
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
HSLO_ECOLI
P0A6Y5
hslO
b3401 JW5692
33 kDa chaperonin (Heat shock protein 33) (HSP33)
Peripheral inner membrane protein facing the cytoplasm
F1
IM (predicted)
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
DNAK_ECOLI
P0A6Y8
dnaK
b0014 JW0013
Chaperone protein dnaK (HSP70) (Heat shock 70 kDa protein) (Heat shock protein 70)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
CytoplasmCell inner membrane | Peripheral membrane protein
Cytoplasmic (Experimental)
 
 
 
 
 
yes
yes
HTPG_ECOLI
P0A6Z3
htpG
b0473 JW0462
Chaperone protein htpG (Heat shock protein C62.5) (Heat shock protein htpG) (High temperature protein G)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
CytoplasmCell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
IF2_ECOLI
P0A705
infB
b3168 JW3137
Translation initiation factor IF-2
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
IF3_ECOLI
P0A707
infC
b1718 JW5829
Translation initiation factor IF-3 [Cleaved into: Translation initiation factor IF-3, N-terminally processed; Translation initiation factor IF-3S]
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
no
yes
KPRS_ECOLI
P0A717
prs
b1207 JW1198
Ribose-phosphate pyrophosphokinase (RPPK) (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthase) (P-Rib-PP synthase) (PRPP synthase)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
MINE_ECOLI
P0A734
minE
b1174 JW1163
Cell division topological specificity factor
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
KEFF_ECOLI
P0A754
kefF
b0046 JW0045
Glutathione-regulated potassium-efflux system ancillary protein kefF
Peripheral inner membrane protein facing the cytoplasm
F1
IM (predicted)
 
Cytoplasmic
 
 
 
 
 
yes
yes
KEFG_ECOLI
P0A756
kefG
b3351 JW3314
Glutathione-regulated potassium-efflux system ancillary protein kefG
Peripheral inner membrane protein facing the cytoplasm
F1
IM (predicted)
 
Cytoplasmic
 
 
 
 
 
yes
yes
NAGB_ECOLI
P0A759
nagB
b0678 JW0664
Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (GlcN6P deaminase) (GNPDA) (Glucosamine-6-phosphate isomerase)
Peripheral inner membrane protein facing the cytoplasm
F1
IM (predicted)
 
Cytoplasmic
 
 
 
 
 
yes
yes
NDK_ECOLI
P0A763
ndk
b2518 JW2502
Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
no
yes
RPPH_ECOLI
P0A776
rppH
b2830 JW2798
RNA pyrophosphohydrolase (EC 3.6.1.-) ((Di)nucleoside polyphosphate hydrolase) (Ap5A pyrophosphatase)
Nucleoid, Peripheral inner membrane protein facing the cytoplasm
N, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
K6PF1_ECOLI
P0A796
pfkA
b3916 JW3887
6-phosphofructokinase isozyme 1 (EC 2.7.1.11) (6-phosphofructokinase isozyme I) (Phosphofructokinase 1) (Phosphohexokinase 1)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
PGK_ECOLI
P0A799
pgk
b2926 JW2893
Phosphoglycerate kinase (EC 2.7.2.3)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
PLSB_ECOLI
P0A7A7
plsB
b4041 JW4001
Glycerol-3-phosphate acyltransferase (GPAT) (EC 2.3.1.15)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cell inner membrane | Peripheral membrane protein | Cytoplasmic side
Cytoplasmic
 
 
 
 
 
no
yes
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