STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
RECF_ECOLI
P0A7H0
recF
b3700 JW3677
cytoplasmic nucleoid peripheral IM protein, DNA replication and repair RecF
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
RIBB_ECOLI
P0A7J0
ribB
b3041 JW3009
cytoplasmic peripheral IM protein, 3,4-dihydroxy-2-butanone 4-phosphate synthase RibB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell membrane
Cytoplasmic
 
 
 
 
 
yes
yes
RIMM_ECOLI
P0A7X6
rimM
b2608 JW5413
ribosomal cytoplasmic peripheral IM protein, Ribosome maturation factor RimM
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm, ribosomal
A, F1, r
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
RNC_ECOLI
P0A7Y0
rnc
b2567 JW2551
cytoplasmic nucleoid peripheral IM protein, Ribonuclease 3 Rnc
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
RPOA_ECOLI
P0A7Z4
rpoA
b3295 JW3257
cytoplasmic nucleoid peripheral IM protein, DNA-directed RNA polymerase subunit alpha RpoA
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
RPOZ_ECOLI
P0A800
rpoZ
b3649 JW3624
cytoplasmic nucleoid peripheral IM protein, DNA-directed RNA polymerase subunit omega RpoZ
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
RRF_ECOLI
P0A805
frr
b0172 JW0167
cytoplasmic peripheral IM protein, Ribosome-recycling factor Frr
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
METK_ECOLI
P0A817
metK
b2942 JW2909
cytoplasmic peripheral IM protein, S-adenosylmethionine synthase MetK
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
GLYA_ECOLI
P0A825
glyA
b2551 JW2535
cytoplasmic peripheral IM protein, Serine hydroxymethyltransferase
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
SUCC_ECOLI
P0A836
sucC
b0728 JW0717
cytoplasmic peripheral IM protein, Succinate--CoA ligase SucC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
TF
 
 
 
yes
yes
TIG_ECOLI
P0A850
tig
b0436 JW0426
cytoplasmic peripheral IM protein, Trigger factor Tig
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
TPIS_ECOLI
P0A858
tpiA
b3919 JW3890
cytoplasmic peripheral IM protein, Triosephosphate isomerase TpiA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
TPX_ECOLI
P0A862
tpx
b1324 JW1317
cytoplasmic peripheral IM protein, Thiol peroxidase Tpx
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Periplasm
Periplasmic (Experimental)
 
 
 
 
 
yes
yes
TALB_ECOLI
P0A870
talB
b0008 JW0007
cytoplasmic peripheral IM protein, Transaldolase B TalB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
RAPZ_ECOLI
P0A894
rapZ
b3205 JW3172
cytoplasmic peripheral IM protein, RNase adapter RapZ
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
RIMP_ECOLI
P0A8A8
rimP
b3170 JW5533
cytoplasmic peripheral IM protein, Ribosome maturation factor RimP
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
YIHI_ECOLI
P0A8H6
yihI
b3866 JW3837
cytoplasmic peripheral IM protein, Der GTPase-activating YihI
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
RHLB_ECOLI
P0A8J8
rhlB
b3780 JW3753
cytoplasmic nucleoid peripheral IM protein, ATP-dependent RNA helicase RhlB
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
PSD_ECOLI
P0A8K1
psd
b4160 JW4121
cytoplasmic peripheral IM protein, Phosphatidylserine decarboxylase proenzyme Psd
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cell membrane
Cytoplasmic (Experimental)
 
 
 
 
 
no
yes
SYS_ECOLI
P0A8L1
serS
b0893 JW0876
cytoplasmic peripheral IM protein, Serine--tRNA ligase SerS
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
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