STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
SYN_ECOLI
P0A8M0
asnS
b0930 JW0913
cytoplasmic peripheral IM protein, Asparagine--tRNA ligase AsnS
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
SYT_ECOLI
P0A8M3
thrS
b1719 JW1709
cytoplasmic peripheral IM protein, Threonine--tRNA ligase ThrS
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
MATP_ECOLI
P0A8N0
matP
b0956 JW0939
cytoplasmic nucleoid peripheral IM protein, Macrodomain Ter protein MatP
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
Cytoplasm
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
 
 
 
 
 
yes
yes
FETP_ECOLI
P0A8P3
yggX
b2962 JW2929
cytoplasmic peripheral IM protein, Probable Fe(2+)-trafficking protein YggX
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
no
yes
RRAA_ECOLI
P0A8R0
rraA
b3929 JW3900
cytoplasmic nucleoid peripheral IM protein, Regulator of ribonuclease activity A RraA
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
no
yes
RPOC_ECOLI
P0A8T7
rpoC
b3988 JW3951
cytoplasmic nucleoid peripheral IM protein, DNA-directed RNA polymerase subunit beta' RpoC
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
 
Cytoplasmic
 
TF
 
 
 
yes
yes
SYDP_ECOLI
P0A8U0
syd
b2793 JW2764
cytoplasmic peripheral IM protein, Syd
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side
Cytoplasmic
 
 
 
 
 
yes
yes
RPOB_ECOLI
P0A8V2
rpoB
b3987 JW3950
cytoplasmic nucleoid peripheral IM protein, DNA-directed RNA polymerase subunit beta RpoB
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
 
Cytoplasmic
 
TF
 
 
 
yes
yes
YJGA_ECOLI
P0A8X0
yjgA
b4234 JW4193
cytoplasmic peripheral IM protein, UPF0307 YjgA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm, ribosomal
A, F1, r
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
YBGC_ECOLI
P0A8Z3
ybgC
b0736 JW0726
cytoplasmic peripheral IM protein, Acyl-CoA thioester hydrolase YbgC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell inner membrane
Cytoplasmic
 
 
 
 
 
yes
yes
RIMJ_ECOLI
P0A948
rimJ
b1066 JW1053
cytoplasmic peripheral IM protein, Ribosomal-protein-alanine acetyltransferase RimJ
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
FABB_ECOLI
P0A953
fabB
b2323 JW2320
cytoplasmic peripheral IM protein, 3-oxoacyl-(acyl-carrier-protein) synthase 1 FabB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
ALKH_ECOLI
P0A955
eda
b1850 JW1839
cytoplasmic peripheral IM protein, KHG/KDPG aldolase Eda
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
ALF1_ECOLI
P0A991
fbaB
b2097 JW5344
cytoplasmic peripheral IM protein, Fructose-bisphosphate aldolase class 1 FbaB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
no
yes
GLPC_ECOLI
P0A996
glpC
b2243 JW2237
cytoplasmic peripheral IM protein, Anaerobic glycerol-3-phosphate dehydrogenase subunit C GlpC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cell inner membrane; Peripheral membrane protein
Membrane associated (Experimental)
 
 
 
 
 
yes
yes
FTNB_ECOLI
P0A9A2
ftnB
b1902 JW1890
cytoplasmic peripheral IM protein, Bacterial non-heme ferritin-like protein FtnB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
FTSZ_ECOLI
P0A9A6
ftsZ
b0095 JW0093
cytoplasmic peripheral IM protein, Cell division FtsZ
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
G3P1_ECOLI
P0A9B2
gapA
b1779 JW1768
cytoplasmic peripheral IM protein, Glyceraldehyde-3-phosphate dehydrogenase A GapA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
GLPA_ECOLI
P0A9C0
glpA
b2241 JW2235
cytoplasmic peripheral IM protein, Anaerobic glycerol-3-phosphate dehydrogenase subunit A GlpA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cell inner membrane; Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
DAPD_ECOLI
P0A9D8
dapD
b0166 JW0161
cytoplasmic peripheral IM protein, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase DapD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
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