STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
ALKH_ECOLI
P0A955
eda
b1850 JW1839
KHG/KDPG aldolase [Includes: 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) (2-keto-4-hydroxyglutarate aldolase) (KHG-aldolase); 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) (2-keto-3-deoxy-6-phosphogluconate aldolase) (KDPG-aldolase) (Phosp
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
ALF1_ECOLI
P0A991
fbaB
b2097 JW5344
Fructose-bisphosphate aldolase class 1 (EC 4.1.2.13) (Fructose-biphosphate aldolase class I) (FBP aldolase)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
no
yes
GLPC_ECOLI
P0A996
glpC
b2243 JW2237
Anaerobic glycerol-3-phosphate dehydrogenase subunit C (G-3-P dehydrogenase)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cell inner membrane | Peripheral membrane protein
Membrane associated (Experimental)
 
 
 
 
 
yes
yes
FTNB_ECOLI
P0A9A2
ftnB
b1902 JW1890
Ferritin-like protein 2
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
FTSZ_ECOLI
P0A9A6
ftsZ
b0095 JW0093
Cell division protein ftsZ
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
G3P1_ECOLI
P0A9B2
gapA
b1779 JW1768
Glyceraldehyde-3-phosphate dehydrogenase A (GAPDH-A) (EC 1.2.1.12)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
GLPA_ECOLI
P0A9C0
glpA
b2241 JW2235
Anaerobic glycerol-3-phosphate dehydrogenase subunit A (G-3-P dehydrogenase) (EC 1.1.5.3)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
DAPD_ECOLI
P0A9D8
dapD
b0166 JW0161
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
CYSB_ECOLI
P0A9F3
cysB
b1275 JW1267
HTH-type transcriptional regulator cysB (Cys regulon transcriptional activator)
Nucleoid, Peripheral inner membrane protein facing the cytoplasm
N, F1
IM (predicted)
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
ACEA_ECOLI
P0A9G6
aceA
b4015 JW3975
Isocitrate lyase (ICL) (Isocitrase) (Isocitratase) (EC 4.1.3.1)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
CFA_ECOLI
P0A9H7
cfa
b1661 JW1653
Cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) (Cyclopropane fatty acid synthase) (EC 2.1.1.79)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
YidC
 
 
yes
yes
CHEZ_ECOLI
P0A9H9
cheZ
b1881 JW1870
Protein phosphatase CheZ (EC 3.1.3.-) (Chemotaxis protein CheZ)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
PHOL_ECOLI
P0A9K3
ybeZ
b0660 JW0657
PhoH-like protein
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
PHOU_ECOLI
P0A9K7
phoU
b3724 JW3702
Phosphate transport system protein phoU
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
SLYD_ECOLI
P0A9K9
slyD
b3349 JW3311
FKBP-type peptidyl-prolyl cis-trans isomerase slyD (PPIase) (EC 5.2.1.8) (Histidine-rich protein) (Metallochaperone slyD) (Rotamase) (Sensitivity to lysis protein D) (WHP)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
DLDH_ECOLI
P0A9P0
lpdA
b0116 JW0112
Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) (Glycine cleavage system L protein)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
CytoplasmCell inner membrane | Peripheral membrane proteinPeripheral membrane protein
Cytoplasmic (Experimental)
 
TF
 
 
 
yes
yes
DEAD_ECOLI
P0A9P6
deaD
b3162 JW5531
Cold-shock DEAD box protein A (EC 3.6.4.13) (ATP-dependent RNA helicase deaD) (Translation factor W2)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
ARCA_ECOLI
P0A9Q1
arcA
b4401 JW4364
Aerobic respiration control protein ArcA (Dye resistance protein)
Nucleoid, Peripheral inner membrane protein facing the cytoplasm
N, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
ACCD_ECOLI
P0A9Q5
accD
b2316 JW2313
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 6.4.1.2)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
ADHE_ECOLI
P0A9Q7
adhE
b1241 JW1228
Aldehyde-alcohol dehydrogenase [Includes: Alcohol dehydrogenase (ADH) (EC 1.1.1.1); Acetaldehyde dehydrogenase [acetylating] (ACDH) (EC 1.2.1.10); Pyruvate-formate-lyase deactivase (PFL deactivase)]
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
 
Cytoplasmic
 
TF
 
 
 
yes
yes
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