STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
DHAS_ECOLI
P0A9Q9
asd
b3433 JW3396
Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11)
Peripheral inner membrane protein facing the cytoplasm
F1
IM (predicted-detected)
 
Cytoplasmic
 
 
 
 
 
yes
yes
FTSE_ECOLI
P0A9R7
ftsE
b3463 JW3428
Cell division ATP-binding protein ftsE
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
GATD_ECOLI
P0A9S3
gatD
b2091 JW2075
Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)
Peripheral inner membrane protein facing the cytoplasm
F1
IM (predicted)
 
Cytoplasmic
 
TF
 
 
 
no
yes
LIVG_ECOLI
P0A9S7
livG
b3455 JW3420
High-affinity branched-chain amino acid transport ATP-binding protein livG (LIV-I protein G)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
YBBA_ECOLI
P0A9T8
ybbA
b0495 JW0484
Uncharacterized ABC transporter ATP-binding protein ybbA
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
YBHF_ECOLI
P0A9U1
ybhF
b0794 JW5104
Uncharacterized ABC transporter ATP-binding protein ybhF
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
yes
yes
YBIT_ECOLI
P0A9U3
ybiT
b0820 JW0804
Uncharacterized ABC transporter ATP-binding protein ybiT
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
LPTB_ECOLI
P0A9V1
lptB
b3201 JW3168
Lipopolysaccharide export system ATP-binding protein lptB (EC 3.6.3.-)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
CytoplasmCell inner membrane | Peripheral membrane protein | Cytoplasmic side
Cytoplasmic(experimental)
 
 
 
 
 
yes
yes
YJJK_ECOLI
P0A9W3
yjjK
b4391 JW4354
Uncharacterized ABC transporter ATP-binding protein yjjK
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
TF
 
 
 
yes
yes
ZNUC_ECOLI
P0A9X1
znuC
b1858 JW1847
Zinc import ATP-binding protein ZnuC (EC 3.6.3.-)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
MREB_ECOLI
P0A9X4
mreB
b3251 JW3220
Rod shape-determining protein mreB
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
 
Cytoplasmic (Experimental)
 
TF
 
 
 
yes
yes
OMPR_ECOLI
P0AA16
ompR
b3405 JW3368
Transcriptional regulatory protein ompR
Nucleoid, Peripheral inner membrane protein facing the cytoplasm
N, F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
THIO_ECOLI
P0AA25
trxA
b3781 JW5856
Thioredoxin-1 (Trx-1)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
TF
 
 
 
no
yes
CLSB_ECOLI
P0AA84
clsB
b0789 JW0772
Putative cardiolipin synthase ybhO (CL synthase) (EC 2.7.8.-)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cell membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
UBID_ECOLI
P0AAB4
ubiD
b3843 JW3819
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) (Polyprenyl p-hydroxybenzoate decarboxylase)
Peripheral inner membrane protein facing the cytoplasm
F1
IM (predicted)
Cell membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
USPD_ECOLI
P0AAB8
uspD
b3923 JW3894
Universal stress protein D
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
ARAG_ECOLI
P0AAF3
araG
b1900 JW1888
Arabinose import ATP-binding protein AraG (EC 3.6.3.17)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
ARTP_ECOLI
P0AAF6
artP
b0864 JW0848
Arginine transport ATP-binding protein ArtP (EC 3.6.3.-)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cell inner membrane | Peripheral membrane protein
Cytoplasmic (Experimental)
 
 
 
 
 
yes
yes
DPPD_ECOLI
P0AAG0
dppD
b3541 JW3510
Dipeptide transport ATP-binding protein dppD
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
GLTL_ECOLI
P0AAG3
gltL
b0652 JW0647
Protein maoC (Phenylacetic acid degradation protein paaZ)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
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