STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
AMPN_ECOLI
P04825
pepN
b0932 JW0915
Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide hydrolase)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cell inner membrane | Peripheral membrane protein | Cytoplasmic side
Cytoplasmic (Experimental)
 
 
 
 
 
yes
yes
SUFA_ECOLI
P77667
sufA
b1684 JW1674
Fumarate and nitrate reduction regulatory protein
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
no
RBSA_ECOLI
P04983
rbsA
b3749 JW3728
Ribose import ATP-binding protein RbsA (EC 3.6.3.17)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
FUMC_ECOLI
P05042
fumC
b1611 JW1603
Fumarate hydratase class II (Fumarase C) (EC 4.2.1.2)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
PNP_ECOLI
P05055
pnp
b3164 JW5851
Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
PTHA_ECOLI
P05706
srlB
b2704 JW2673
Glucitol/sorbitol-specific phosphotransferase enzyme IIA component (EC 2.7.1.-) (EIIA-Gut) (EIII-Gut) (PTS system glucitol/sorbitol-specific EIIA component)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
no
yes
ILVD_ECOLI
P05791
ilvD
b3771 JW5605
Dihydroxy-acid dehydratase (DAD) (EC 4.2.1.9)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
ILVC_ECOLI
P05793
ilvC
b3774 JW3747
Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
yes
yes
BGLR_ECOLI
P05804
uidA
b1617 JW1609
Beta-glucuronidase (GUS) (EC 3.2.1.31) (Beta-D-glucuronoside glucuronosohydrolase)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
no
yes
DLD_ECOLI
P06149
dld
b2133 JW2121
D-lactate dehydrogenase (EC 1.1.1.28) (Respiratory D-lactate dehydrogenase)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
Cell membrane | Peripheral membrane protein | Cytoplasmic side
Cytoplasmic
 
 
YidC
 
 
yes
yes
BTUD_ECOLI
P06611
btuD
b1709 JW1699
Vitamin B12 import ATP-binding protein BtuD (EC 3.6.3.33) (Vitamin B12-transporting ATPase)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
ERA_ECOLI
P06616
era
b2566 JW2550
GTP-binding protein era
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cell membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
ODP2_ECOLI
P06959
aceF
b0115 JW0111
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (E2)
Peripheral inner membrane protein facing the cytoplasm
F1
Soluble IM Fraction
 
Cytoplasmic
 
TF
 
 
 
no
yes
FLIM_ECOLI
P06974
fliM
b1945 JW1929
Flagellar motor switch protein FliM
Peripheral inner membrane protein facing the cytoplasm
F1
IM (predicted)
Cell inner membrane | Peripheral membrane proteinBacterial flagellum basal body
Cytoplasmic
flagellum
 
 
 
 
no
yes
HIS7_ECOLI
P06987
hisB
b2022 JW2004
Histidine biosynthesis bifunctional protein hisB [Includes: Histidinol-phosphatase (EC 3.1.3.15); Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19)]
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
RSMA_ECOLI
P06992
rsmA
b0051 JW0050
Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.-) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (High level kasugamycin resistance protein ksgA) (Kasugamycin dimethyltransferase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) d
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
MALT_ECOLI
P06993
malT
b3418 JW3381
HTH-type transcriptional regulator MalT
Nucleoid, Peripheral inner membrane protein facing the cytoplasm
N, F1
N/A
 
Cytoplasmic
 
TF
 
 
 
yes
yes
PLDB_ECOLI
P07000
pldB
b3825 JW5584
Lysophospholipase L2 (EC 3.1.1.5) (Lecithinase B)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cell inner membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
POXB_ECOLI
P07003
poxB
b0871 JW0855
Pyruvate dehydrogenase [ubiquinone] (EC 1.2.5.1) (Pyruvate oxidase) (POX) [Cleaved into: Alpha-peptide]
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cell membrane | Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
PROA_ECOLI
P07004
proA
b0243 JW0233
Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
Peripheral inner membrane protein facing the cytoplasm
F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
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