STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
BTUD_ECOLI
P06611
btuD
b1709 JW1699
cytoplasmic peripheral IM protein, Vitamin B12 import ATP-binding BtuD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell inner membrane; Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
ERA_ECOLI
P06616
era
b2566 JW2550
ribosomal cytoplasmic peripheral IM protein, GTPase Era
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm, ribosomal
A, F1, r
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
ODP2_ECOLI
P06959
aceF
b0115 JW0111
cytoplasmic peripheral IM protein, Dihydroyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex AceF
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
 
Cytoplasmic
 
TF
 
 
 
no
yes
FLIM_ECOLI
P06974
fliM
b1945 JW1929
Flagellar cytoplasmic peripheral IM protein, motor switch FliM
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
IM (predicted)
Cell inner membrane; Peripheral membrane protein Bacterial flagellum basal body
Cytoplasmic
flagellum
 
 
 
 
no
yes
HIS7_ECOLI
P06987
hisB
b2022 JW2004
cytoplasmic peripheral IM protein, Histidine biosynthesis bifunctional HisB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
RSMA_ECOLI
P06992
rsmA
b0051 JW0050
cytoplasmic peripheral IM protein, Ribosomal RNA small subunit methyltransferase A RsmA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
MALT_ECOLI
P06993
malT
b3418 JW3381
cytoplasmic nucleoid peripheral IM protein, HTH-type transcriptional regulator MalT
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
 
Cytoplasmic
 
TF
 
 
 
yes
yes
PLDB_ECOLI
P07000
pldB
b3825 JW5584
cytoplasmic peripheral IM protein, Lysophospholipase L2 PldB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell inner membrane; Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
POXB_ECOLI
P07003
poxB
b0871 JW0855
cytoplasmic peripheral IM protein, Pyruvate dehydrogenase PoxB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell membrane; Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
PROA_ECOLI
P07004
proA
b0243 JW0233
cytoplasmic peripheral IM protein, Gamma-glutamyl phosphate reductase ProA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
SDHB_ECOLI
P07014
sdhB
b0724 JW0714
cytoplasmic peripheral IM protein, Succinate dehydrogenase iron-sulfur subunit SdhB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
IM (predicted)
Cell inner membrane
Cytoplasmic (Experimental)
 
 
 
 
 
yes
yes
HISP_ECOLI
P07109
hisP
b2306 JW2303
cytoplasmic peripheral IM protein, Histidine transport ATP-binding HisP
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cell inner membrane; Peripheral membrane protein
Cytoplasmic
 
 
 
 
 
yes
yes
CHEA_ECOLI
P07363
cheA
b1888 JW1877
cytoplasmic peripheral IM protein, Chemotaxis CheA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
IM (predicted), Soluble IM Fraction +
Cytoplasm
Cytoplasmic
 
 
 
 
 
no
yes
SYFB_ECOLI
P07395
pheT
b1713 JW1703
cytoplasmic peripheral IM protein, Phenylalanine--tRNA ligase beta subunit PheT
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
TYPH_ECOLI
P07650
deoA
b4382 JW4345
cytoplasmic peripheral IM protein, Thymidine phosphorylase DeoA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
IM (predicted)
 
Cytoplasmic
 
 
 
 
 
no
yes
FHUC_ECOLI
P07821
fhuC
b0151 JW0147
cytoplasmic peripheral IM protein, Iron(3+)-hydroxamate import ATP-binding FhuC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell inner membrane
Cytoplasmic
 
 
 
 
 
yes
yes
IDH_ECOLI
P08200
icd
b1136 JW1122
cytoplasmic peripheral IM protein, Isocitrate dehydrogenase (NADP) Icd
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
IM (predicted)
 
Cytoplasmic
 
TF
 
 
 
yes
yes
SYFA_ECOLI
P08312
pheS
b1714 JW5277
cytoplasmic peripheral IM protein, Phenylalanine--tRNA ligase alpha subunit PheS
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
DNAJ_ECOLI
P08622
dnaJ
b0015 JW0014
cytoplasmic peripheral IM protein, Chaperone DnaJ
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
PT1_ECOLI
P08839
ptsI
b2416 JW2409
cytoplasmic peripheral IM protein, Phosphoenolpyruvate-phosphotransferase PtsI
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
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